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Series GSE84145 Query DataSets for GSE84145
Status Public on Sep 30, 2016
Title Transcriptome profile of wildtype and Ret homozygote null mouse guts at E11.5 and E12.5
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Total mRNA seq was perfomed on widtype and Ret null mouse embryonic gut at 2 stages of devlopment- E11.5 and E12.5
 
Overall design Total RNA from 3 replicates each of wildtype and Ret null emryonic gut was converted to cDNA and run on HiSeq 2000 (75 bp paired end)
 
Contributor(s) Chatterjee S, Chakravarti A
Citation(s) 27693352
Submission date Jul 07, 2016
Last update date May 15, 2019
Contact name Sumantra Chatterjee
E-mail(s) sumantra@jhmi.edu
Organization name Johns Hopkins University School of Medicine
Department Institute of Genetic Medicine
Street address 733 N Broadway, Room 572
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (12)
GSM2227709 E11.5 WT GUT REP1
GSM2227710 E11.5 WT GUT REP2
GSM2227711 E11.5 WT GUT REP3
Relations
BioProject PRJNA328144
SRA SRP078061

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84145_E11.5RET_WT_NULL.txt.gz 851.9 Kb (ftp)(http) TXT
GSE84145_E12.5RET_WT_NULL.txt.gz 854.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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