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Series GSE83885 Query DataSets for GSE83885
Status Public on Jun 29, 2017
Title Genome-wide effect of constitutive interferon on gene-expression
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Using mice deficient for several genes that contribute to constitutive levels of type I interferon, we compared genome-wide expressionof RNA in rested macrophages of these mice.
Overall design To look for the role of constitutive interferon, we matured bone marrow derived macrophages from different mouse strains including strains with deficiency for IFNAR (interferon receptor) and STING (Stimulator if Interferon Genes) and compared levels of expression of Interferon-stimulated genes (ISGs). One replica of each sample is provided
Contributor(s) Poltorak A, Sarhan J
Citation(s) 31968247, 33397971
Submission date Jun 29, 2016
Last update date Jan 19, 2021
Contact name Alexander Poltorak
Phone 6176363596
Organization name Tufts University
Street address 150 Harrison avenue
City Boston
State/province Massachusetts
ZIP/Postal code 02111
Country USA
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (5)
GSM2220303 C57BL6
GSM2220304 IFNAR-deficient
GSM2220305 MOLF
BioProject PRJNA327247
SRA SRP077588

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83885_genes.fpkm_tracking.txt.gz 1.2 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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