NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE83637 Query DataSets for GSE83637
Status Public on Feb 14, 2017
Title RNA-seq transcriptome analysis of epidermal CD8+CD103+CD49a+ and CD8+CD103+CD49- T cells from healthy human skin
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report the transcriptome analysis of epidermal CD8 tissue resident memory T (TRM) cells from healthy human skin. Specifically, epidermal CD8+CD103+CD49a+ and CD8+CD103+CD49- TRM cells from healthy human skin were sorted by FACS. Differential gene expression analysis revealed functional dichotomy of epidermal CD8+CD103+CD49a+ and CD8+CD103+CD49- TRM cells.
 
Overall design Analysis of differentially expressed genes between epidermal CD8+CD103+CD49a+ and CD8+CD103+CD49- T cells from healthy human skin, biological replicates (n=7) (healthy skin donors).
 
Contributor(s) Cheuk S, Bryceson YT, Eidsmo L
Citation(s) 28214226
Submission date Jun 22, 2016
Last update date May 10, 2023
Contact name Liv Eidsmo
E-mail(s) liv.eidsmo@ki.se
Phone 0851772158
Organization name Karolinska Insitutet
Street address L8:02 Karolinska Univeristy Hospital
City Stockholm
ZIP/Postal code 17177
Country Sweden
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (38)
GSM2211621 CD103+CD49a-CD8 TRM, biological replicate 1
GSM2211622 CD103+CD49a+CD8 TRM, biological replicate 1
GSM2211623 CD103+CD49a-CD8 TRM, biological replicate 2
Relations
BioProject PRJNA326541
SRA SRP076944

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83637_RAW.tar 3.6 Mb (http)(custom) TAR (of TXT)
GSE83637_all.gene.expected_count_ALL.txt.gz 1.0 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap