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Series GSE83592 Query DataSets for GSE83592
Status Public on Jun 21, 2016
Title JQ1 +/- Vemurafenib in BRAF mutant melanoma (A375)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The combination of JQ1 and Vemurafenib acted synergistically in BRAF-mutant cell lines, resulting in marked apoptosis in vitro, with up-regulation of pro-apoptotic proteins. In vivo, combination treatment suppressed tumor growth and significantly improved survival compared to either drug alone. RNA sequencing of tumor tissues revealed almost four thousand genes that were uniquely modulated by the combination, with several anti-apoptotic genes significantly down-regulated.
 
Overall design 16 samples analyzed from 8 mice (each mouse was bearing two tumors, one on each flank) in 4 treatment groups (control, vemurafenib alone, JQ1 alone, JQ1+vemurafenib)
 
Contributor(s) Paoluzzi L, Hernando E
Citation(s) 27169980
Submission date Jun 21, 2016
Last update date May 15, 2019
Contact name Igor Dolgalev
Organization name NYU Grossman School of Medicine
Street address 550 1st Ave
City New York
State/province New York
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (16)
GSM2210563 16L
GSM2210564 16R
GSM2210565 19L
Relations
BioProject PRJNA326440
SRA SRP076879

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83592_fpkm.txt.gz 1.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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