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Series GSE83338 Query DataSets for GSE83338
Status Public on Jun 28, 2017
Title mRNA profiling of liver-specific RORa KO mouse liver
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The retinoic acid receptor-related orphan receptor a (RORa) is a member of the NR1 subfamily of orphan nuclear hormone receptors. RORa is an important regulator of various biological processes, including cerebellum development, cancer and circadian rhythm. To determine molecular mechanism by which hepatic deletion of RORa induces obesity and insulin resistance, we performed global transcriptome analysis from high-fat diet (HFD)-fed RORa f/f and RORa LKO mouse liver tissues. This analysis provides insight into molecular mechanisms for RORa in high-fat-diet condition.
 
Overall design mRNA expression profiles of RORa f/f and RORa LKO mice liver with control diet or high-fat-diet were examined by Illumina HiSeq 2500.
 
Contributor(s) Baek SH, Yu YS, Kim K, Hwang D, Bhin J
Citation(s) 28757615
Submission date Jun 14, 2016
Last update date May 15, 2019
Contact name Young Suk Yu
Organization name Seoul National University
Street address 1-Gwanak-ro, Gwanak-gu
City Seoul
ZIP/Postal code 08826
Country South Korea
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (8)
GSM2199847 mRNA-RORa KO_CD_1 liver
GSM2199848 mRNA-RORa KO_CD_2 liver
GSM2199849 mRNA-RORa KO_HFD_1 liver
Relations
BioProject PRJNA325632
SRA SRP076543

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83338_FPKM.txt.gz 664.7 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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