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Series GSE82910

Query DataSets for GSE82910

Status

Public on Jun 22, 2016

Title

ChIP-seq from forebrain (ENCSR739DVM)

Project

Mouse ENCODE

Organism

Mus musculus

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K4me3 ChIP-seq on embryonic 11.5 day mouse forebrain

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR739DVM/

Citation(s)

22955616

BioProject

PRJNA63471

Submission date

Jun 07, 2016

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL17021

Illumina HiSeq 2500 (Mus musculus)

Samples (2)

GSM2192209	ChIP-seq from forebrain (ENCLB477RDB)
GSM2192210	ChIP-seq from forebrain (ENCLB917HCP)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE82910_ENCFF490QHH_signal_p-value_mm10.bigWig	449.2 Mb	(ftp)(http)	BIGWIG
GSE82910_ENCFF854GQS_peaks_mm10.bigBed	1.5 Mb	(ftp)(http)	BIGBED
GSE82910_ENCFF880ZZM_fold_change_over_control_mm10.bigWig	479.8 Mb	(ftp)(http)	BIGWIG
GSE82910_ENCFF929JFM_replicated_peaks_mm10.bigBed	1.4 Mb	(ftp)(http)	BIGBED
GSE82910_ENCFF946HLH_peaks_mm10.bed.gz	443.4 Kb	(ftp)(http)	BED
GSE82910_ENCFF958GPD_replicated_peaks_mm10.bed.gz	548.4 Kb	(ftp)(http)	BED
GSE82910_RAW.tar	1.3 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record