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Series GSE82777

Query DataSets for GSE82777

Status

Public on Jun 22, 2016

Title

ChIP-seq from limb (ENCSR548BCO)

Project

Mouse ENCODE

Organism

Mus musculus

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K4me1 ChIP-seq on embryonic 11.5 day mouse limb

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR548BCO/

Citation(s)

22955616

BioProject

PRJNA63471

Submission date

Jun 07, 2016

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL17021

Illumina HiSeq 2500 (Mus musculus)

Samples (2)

GSM2191915	ChIP-seq from limb (ENCLB185SRH)
GSM2191916	ChIP-seq from limb (ENCLB252QUE)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE82777_ENCFF276SQF_peaks_mm10.bigBed	3.1 Mb	(ftp)(http)	BIGBED
GSE82777_ENCFF297ALM_peaks_mm10.bed.gz	1.4 Mb	(ftp)(http)	BED
GSE82777_ENCFF352OIG_replicated_peaks_mm10.bed.gz	1.3 Mb	(ftp)(http)	BED
GSE82777_ENCFF539HML_signal_p-value_mm10.bigWig	498.2 Mb	(ftp)(http)	BIGWIG
GSE82777_ENCFF837PXP_replicated_peaks_mm10.bigBed	2.5 Mb	(ftp)(http)	BIGBED
GSE82777_ENCFF956BOI_fold_change_over_control_mm10.bigWig	761.1 Mb	(ftp)(http)	BIGWIG
GSE82777_RAW.tar	1.7 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record