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Series GSE81977 Query DataSets for GSE81977
Status Public on Mar 22, 2019
Title E-cadherin loss induces autocrine activation of oncogenic growth factor signalling in metastatic lobular breast cancer.
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Background: Despite the fact that loss of E-cadherin is causal to the development and progression of invasive lobular breast cancer (ILC), no targeted therapy is available to treat this major breast cancer subtype. This study is aimed at identifying clinically targetable pathways that are aberrantly active downstream of E-cadherin loss in ILC.
Methods: Reverse-phase protein array (RPPA) analyses were performed in the context of E-cadherin loss using mouse and human breast cancer cells. A combination of mRNA sequencing, conditioned medium growth assays and CRISPR-Cas9 knock-out experiments were performed to identify and validate activation of oncogenic pathways in ILC. Human ILC samples were employed to validate activation by immunohistochemistry on tissue micro-arrays. Finally, we assessed the effect of pathway inhibition using anoikis resistance and anchorage-dependent growth in vitro.
Results: We demonstrate that E-cadherin loss leads to increased activation of FAK and PI3K/AKT signalling. Autocrine activation of growth factor receptor signalling and its downstream PI3K/AKT hub was a direct consequence of E-cadherin loss, independent of activating mutations in either PIK3CA, AKT or PTEN. Analysis of human ILC samples confirmed pathway activity, and pharmacological inhibition of AKT using AZD5363 and MK2206 resulted in robust inhibition of cell growth and survival of ILC cells in anchorage-dependent and independent conditions. Moreover, our results indicate a role for intracellular FAK in the regulation of ILC anoikis resistance.
Conclusion: Our data demonstrate that E-cadherin loss evokes additional PI3K/AKT activation independent of oncogenic mutations in this pathway. We propose clinical intervention of PI3K/AKT in ILC based on functional E-cadherin inactivation, irrespective of activating pathway mutations.
 
Overall design Expression profiling (RNA-seq) of mouse (mILC-1, mILC-2) and human (IPH-926) invasive lobular carcinoma cell lines in adherent and suspension cell culture conditions.
 
Contributor(s) Tenhagen M, Teo K, ter Hoeve N, Strengman E, Byron A, Mandoli A, Sotoca AM, Singh AA, Martens JH, Stunnenberg HG, Christgen M, van Diest PJ, Brunton VG, Derksen PW
Citation(s) 30337563
Submission date May 27, 2016
Last update date Nov 11, 2021
Contact name Joost Martens
E-mail(s) j.martens@science.ru.nl
Phone 0243780645
Organization name Radboud University
Department RIMLS
Lab Molecular Biology
Street address Geert Grooteplein 28
City Nijmegen
State/province Nederland
ZIP/Postal code 6525GA
Country Netherlands
 
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM2178995 PD_02.0405 (mILC-1)
GSM2178996 PD_07.2505 (mILC-2)
GSM2178997 PD_10.0405 (mILC-1 suspension)
Relations
BioProject PRJNA323547
SRA SRP075807

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Supplementary file Size Download File type/resource
GSE81977_RAW.tar 31.1 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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