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Series GSE81944 Query DataSets for GSE81944
Status Public on Feb 14, 2017
Title Ontogenetic onset of immune-relevant genes in the common sole (Solea solea)
Organism Solea solea
Experiment type Expression profiling by array
Summary A microarray platform for Solea solea was employed to study gene expression profiles of common sole developmental stages.
 
Overall design Characterization of the transcriptome of S. solea, focusing on larval and juvenile stages. Pooled samples of 10–5 individuals (depending on larval age) were sampled and RNA extracted at 1, 4, 6, 8, 11, 13, 15, 18, 24 and 33 days post-hatching (dph). The number of biological replicates was four for each sampling point. Gene expression profiling was performed using the Agilent-036353 Solea solea oligo microarray (GPL16124) based on single-colour detection (Cyanine-3 only).
 
Contributor(s) Ferraresso S, Bargelloni L
Citation(s) 27554393
Submission date May 26, 2016
Last update date Feb 14, 2017
Contact name Serena Ferraresso
E-mail(s) serena.ferraresso@unipd.it
Phone +39 049 8272506
Organization name University of Padova
Department Dept of Comparative Biomedicine and Food Science
Street address Viale dell'Università
City Legnaro (PD)
State/province Padova
ZIP/Postal code 35020
Country Italy
 
Platforms (1)
GPL16124 Agilent-036353 S.solea_v2 array (Feature Number version)
Samples (39)
GSM2178256 S. solea 1 dph 1d_A
GSM2178257 S. solea 1 dph 1d_B
GSM2178258 S. solea 1 dph 1d_C
Relations
BioProject PRJNA323479

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE81944_RAW.tar 82.7 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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