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| Status |
Public on Apr 30, 2016 |
| Title |
Genomics of decitabine responses |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
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| Summary |
Global DNA methylation was analyzed in total bone marrow cells of AML/MDS patients undergoing decitabine treatment.
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| Overall design |
Patients with AML or MDS were treated with decitabine 20 mg/m2/day on days 1-10. Bone marrow samples were collected on day 0 and day 10. DNA was generated from total bone marrow cells, and analyzed for changes in methylation.
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| Contributor(s) |
Welch JS, Petti AA |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Apr 28, 2016 |
| Last update date |
Mar 22, 2019 |
| Contact name |
Christopher A Miller |
| E-mail(s) |
c.a.miller@wustl.edu
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| Organization name |
Washington University in St Louis
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| Department |
Oncology
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| Street address |
660 S Euclid Ave
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| City |
Saint Louis |
| State/province |
MO |
| ZIP/Postal code |
63110 |
| Country |
USA |
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| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
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| Samples (80)
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| GSM2136639 |
Patient 1002, Day 0 |
| GSM2136640 |
Patient 1003, Cycle 1, Day 10 |
| GSM2136641 |
Patient 1003, Day 0 |
| GSM2136642 |
Patient 1004, Cycle 1, Day 10 |
| GSM2136643 |
Patient 1004, Day 0 |
| GSM2136644 |
Patient 1009, Cycle 1, Day 10 |
| GSM2136645 |
Patient 1009, Day 0 |
| GSM2136646 |
Patient 1011, Cycle 1, Day 10 |
| GSM2136647 |
Patient 1011, Day 0 |
| GSM2136648 |
Patient 1012, Cycle 1, Day 10 |
| GSM2136649 |
Patient 1012, Day 0 |
| GSM2136650 |
Patient 1014, Cycle 1, Day 10 |
| GSM2136651 |
Patient 1014, Day 0 |
| GSM2136652 |
Patient 1016, Cycle 1, Day 10 |
| GSM2136653 |
Patient 1016, Day 0 |
| GSM2136654 |
Patient 1017, Cycle 1, Day 10 |
| GSM2136655 |
Patient 1017, Day 0 |
| GSM2136656 |
Patient 1018, Cycle 1, Day 10 |
| GSM2136657 |
Patient 1018, Day 0 |
| GSM2136658 |
Patient 1019, Cycle 1, Day 10 |
| GSM2136659 |
Patient 1019, Day 0 |
| GSM2136663 |
Patient 1021, Cycle 1, Day 10 |
| GSM2136665 |
Patient 1021, Day 0 |
| GSM2136666 |
Patient 1023, Cycle 1, Day 10 |
| GSM2136667 |
Patient 1023, Day 0 |
| GSM2136668 |
Patient 1024, Cycle 1, Day 10 |
| GSM2136669 |
Patient 1024, Day 0 |
| GSM2136670 |
Patient 1025, Cycle 1, Day 10 |
| GSM2136671 |
Patient 1025, Day 0 |
| GSM2136672 |
Patient 1032, Cycle 1, Day 10 |
| GSM2136673 |
Patient 1032, Day 0 |
| GSM2136674 |
Patient 1035, Cycle 1, Day 10 |
| GSM2136675 |
Patient 1035, Day 0 |
| GSM2136676 |
Patient 1039, Cycle 1, Day 10 |
| GSM2136677 |
Patient 1039, Day 0 |
| GSM2136678 |
Patient 1041, Cycle 1, Day 10 |
| GSM2136679 |
Patient 1041, Day 0 |
| GSM2136680 |
Patient 1050, Cycle 1, Day 10 |
| GSM2136681 |
Patient 1050, Day 0 |
| GSM2136682 |
Patient 1051, Cycle 1, Day 10 |
| GSM2136683 |
Patient 1051, Day 0 |
| GSM2136684 |
Patient 1052, Cycle 1, Day 10 |
| GSM2136685 |
Patient 1052, Day 0 |
| GSM2136686 |
Patient 1053, Cycle 1, Day 10 |
| GSM2136687 |
Patient 1053, Day 0 |
| GSM2136688 |
Patient 1058, Cycle 1, Day 10 |
| GSM2136689 |
Patient 1058, Day 0 |
| GSM2136690 |
Patient 1061, Cycle 1, Day 10 |
| GSM2136691 |
Patient 1061, Day 0 |
| GSM2136692 |
Patient 1064, Cycle 1, Day 10 |
| GSM2136693 |
Patient 1064, Day 0 |
| GSM2136694 |
Patient 1065, Cycle 1, Day 10 |
| GSM2136695 |
Patient 1065, Day 0 |
| GSM2136696 |
Patient 1067, Cycle 1, Day 10 |
| GSM2136697 |
Patient 1067, Day 0 |
| GSM2136698 |
Patient 1068, Cycle 1, Day 10 |
| GSM2136699 |
Patient 1068, Day 0 |
| GSM2136700 |
Patient 1069, Cycle 1, Day 10 |
| GSM2136701 |
Patient 1069, Day 0 |
| GSM2136702 |
Patient 1072, Cycle 1, Day 10 |
| GSM2136703 |
Patient 1072, Day 0 |
| GSM2136704 |
Patient 1073, Cycle 1, Day 10 |
| GSM2136705 |
Patient 1073, Day 0 |
| GSM2136706 |
Patient 1074, Cycle 1, Day 10 |
| GSM2136707 |
Patient 1074, Day 0 |
| GSM2136708 |
Patient 1077, Cycle 1, Day 10 |
| GSM2136709 |
Patient 1077, Day 0 |
| GSM2136710 |
Patient 1078, Cycle 1, Day 10 |
| GSM2136711 |
Patient 1078, Day 0 |
| GSM2136712 |
Patient 1079, Cycle 1, Day 10 |
| GSM2136713 |
Patient 1079, Day 0 |
| GSM2136714 |
Patient 1080, Cycle 1, Day 10 |
| GSM2136715 |
Patient 1080, Day 0 |
| GSM2136716 |
Patient 1084, Cycle 1, Day 10 |
| GSM2136717 |
Patient 1084, Day 0 |
| GSM2136718 |
Patient 1085, Cycle 1, Day 10 |
| GSM2136719 |
Patient 1085, Day 0 |
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| Relations |
| BioProject |
PRJNA320091 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE80762_RAW.tar |
837.9 Mb |
(http)(custom) |
TAR (of IDAT) |
| GSE80762_non-normalized.txt.gz |
196.2 Mb |
(ftp)(http) |
TXT |
| Processed data included within Sample table |
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