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Series GSE80373 Query DataSets for GSE80373
Status Public on Apr 18, 2016
Title Spheroid growth in ovarian cancer promotes gene expression involved in epithelial-mesenchymal transition, stem cell promotion, and multiple stress responses
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In this study, we examine gene expression changes through microarray analysis in spheroid versus monolayer ovarian cancer cells treated with TGFβ to induce EMT. Interestingly, EMT, stress response, and stem cell differentiation pathways were all significantly affected by 3D growth. These findings support the hypothesis that three dimensional ovarian cell culturing is physiologically different from its monolayer counterpart.
 
Overall design HEY Ovarian Cancer cells were treated with TGFβ and either cultured as a monolayer or using the hanging drop method to create spheroids. Microarray analysis was conducted on spheroid (3D) versus monolayer cells (2D).
 
Contributor(s) Paullin T, Powell C, Menzie C, Hill R, Cheng F, Martyniuk CJ, Westerheide SD
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Submission date Apr 18, 2016
Last update date Nov 13, 2022
Contact name Christopher Martyniuk
E-mail(s) cmartyn@ufl.edu
Phone 3523173905
Organization name University of Florida
Street address 8891 SW 79th Avenue
City Gainesville
State/province FL
ZIP/Postal code 32608
Country USA
 
Platforms (1)
GPL13667 [HG-U219] Affymetrix Human Genome U219 Array
Samples (8)
GSM2125384 HEY Ovarian Cancer 2D monolayer_01
GSM2125385 HEY Ovarian Cancer 2D monolayer_02
GSM2125386 HEY Ovarian Cancer 2D monolayer_03
Relations
BioProject PRJNA318768

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE80373_RAW.tar 17.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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