|
| Status |
Public on Feb 02, 2018 |
| Title |
Transcriptome of Ago2_KO mouse embryonic stem cells (mESCs) before and after XEN differentiation |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Purpose: Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study was to obtain the trasncriptome of Ago2_KO mESCs to compare it with the transcriptome of WT mESCs before and after XEN conversion (deposit separately).
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| |
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| Overall design |
mRNA profiles of Ago2_KO mESCs, wildtype XEN and Ago2_KO XEN were generated by deep sequencing, using Illumina HiSeq2000. Wild type mESCs were deposited in GSE78971.
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| |
|
| Contributor(s) |
Ciaudo C |
| Citation(s) |
29396181, 30619491 |
| |
| Submission date |
Apr 12, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Constance Ciaudo |
| E-mail(s) |
cciaudo@ethz.ch, ciaudobeyer@gmail.com
|
| Phone |
+41 44 633 08 58
|
| Organization name |
ETH
|
| Department |
D-BIOL
|
| Lab |
Chair of RNAi and Genome Integrity
|
| Street address |
Otto-Stern-Weg 7
|
| City |
Zurich |
| ZIP/Postal code |
8093 |
| Country |
Switzerland |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (7)
|
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| This SubSeries is part of SuperSeries: |
| GSE80454 |
Roles of Argonaute protein in mouse embryonic stem cells |
|
| Relations |
| BioProject |
PRJNA318282 |
| SRA |
SRP073203 |
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