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GEO accession:
Series GSE80098
Query DataSets for GSE80098
Status
Public on Jun 01, 2016
Title
Genomic agonism and phenotypic antagonism between estrogen and progesterone receptors in breast cancer.
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Contributor(s)
Greene G
,
Singhal H
Citation(s)
27386569
Submission date
Apr 10, 2016
Last update date
May 15, 2019
Contact name
Hari Singhal
E-mail(s)
hari_singhal@dfci.harvard.edu
Organization name
University of Chicago
Department
Ben May Department for Cancer Research
Lab
Geoffrey L Greene
Street address
929 E 57th St
City
Chicago
State/province
IL
ZIP/Postal code
60637
Country
USA
Platforms (1)
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
Samples (102)
Less...
More...
GSM2112719
Tumor_P1_Vehicle_24 Hours_RNAseq
GSM2112720
Tumor_P1_E2_24 Hours_RNAseq
GSM2112721
Tumor_P1_R5020_24 Hours_RNAseq
GSM2112722
Tumor_P1_E2+R5020_24 Hours_RNAseq
GSM2112723
Tumor_P2_Vehicle_24 Hours_RNAseq
GSM2112724
Tumor_P2_E2_24 Hours_RNAseq
GSM2112725
Tumor_P2_R5020_24 Hours_RNAseq
GSM2112726
Tumor_P2_E2+R5020_24 Hours_RNAseq
GSM2112727
Tumor_P3_Vehicle_24 Hours_RNAseq
GSM2112728
Tumor_P3_E2_24 Hours_RNAseq
GSM2112729
Tumor_P3_R5020_24 Hours_RNAseq
GSM2112730
Tumor_P3_E2+R5020_24 Hours_RNAseq
GSM2112731
Tumor_P4_Vehicle_48 Hours_RNAseq
GSM2112732
Tumor_P4_E2_48 Hours_RNAseq
GSM2112733
Tumor_P4_R5020_48 Hours_RNAseq
GSM2112734
Tumor_P4_E2+R5020_48 Hours_RNAseq
GSM2112735
Tumor_P5_Vehicle_48 Hours_RNAseq
GSM2112736
Tumor_P5_E2_48 Hours_RNAseq
GSM2112737
Tumor_P5_R5020_48 Hours_RNAseq
GSM2112738
Tumor_P5_E2+R5020_48 Hours_RNAseq
GSM2112739
Tumor_P6_Vehicle_48 Hours_RNAseq
GSM2112740
Tumor_P6_E2_48 Hours_RNAseq
GSM2112741
Tumor_P6_R5020_48 Hours_RNAseq
GSM2112742
Tumor_P6_E2+R5020_48 Hours_RNAseq
GSM2112743
Tumor_P7_Vehicle_24 Hours_RNAseq
GSM2112744
Tumor_P7_E2_24 Hours_RNAseq
GSM2112745
Tumor_P7_R5020_24 Hours_RNAseq
GSM2112746
Tumor_P7_E2+R5020_24 Hours_RNAseq
GSM2112747
Tumor_P8_Vehicle_24 Hours_RNAseq
GSM2112748
Tumor_P8_E2_24 Hours_RNAseq
GSM2112749
Tumor_P8_R5020_24 Hours_RNAseq
GSM2112750
Tumor_P8_E2+R5020_24 Hours_RNAseq
GSM2112751
Tumor_N1_Vehicle_24 Hours_RNAseq
GSM2112752
Tumor_N1_E2_24 Hours_RNAseq
GSM2112753
Tumor_N1_R5020_24 Hours_RNAseq
GSM2112754
Tumor_N1_E2+R5020_24 Hours_RNAseq
GSM2112755
Tumor_N2_Vehicle_48Hours_RNAseq
GSM2112756
Tumor_N2_E2_48 Hours_RNAseq
GSM2112757
Tumor_N2_R5020_48 Hours_RNAseq
GSM2112758
Tumor_N2_E2+R5020_48 Hours_RNAseq
GSM2112759
Tumor_N3_Vehicle_48 Hours_RNAseq
GSM2112760
Tumor_N3_E2_48 Hours_RNAseq
GSM2112761
Tumor_N3_R5020_48 Hours_RNAseq
GSM2112762
Tumor_N3_E2+R5020_48 Hours_RNAseq
GSM2112763
Tumor_N4_Vehicle_24 Hours_RNAseq
GSM2112764
Tumor_N4_E2_24 Hours_RNAseq
GSM2112765
Tumor_N4_R5020_24 Hours_RNAseq
GSM2112766
Tumor_N4_E2+R5020_24 Hours_RNAseq
GSM2112767
Cells_T47D_Vehicle_12 Hours_RNAseq
GSM2112768
Cells_T47D_E2_12 Hours_RNAseq
GSM2112769
Cells_T47D_R5020_12 Hours_RNAseq
GSM2112770
Cells_T47D_E2+R5020_12 Hours_RNAseq
GSM2112771
Cells_ZR75_Vehicle_12 Hours_RNAseq
GSM2112772
Cells_ZR75_E2_12 Hours_RNAseq
GSM2112773
Cells_ZR75_R5020_12 Hours_RNAseq
GSM2112774
Cells_ZR75_E2+R5020_12 Hours_RNAseq
GSM2112775
Cells_T47D_siControl_Vehicle_12 Hours_RNAseq
GSM2112776
Cells_T47D_siControl_E2_12 Hours_RNAseq
GSM2112777
Cells_T47D_siControl_R5020_12 Hours_RNAseq
GSM2112778
Cells_T47D_siControl_E2+R5020_12 Hours_RNAseq
GSM2112779
Cells_T47D_siNF1C_Vehicle_12 Hours_RNAseq
GSM2112780
Cells_T47D_siNF1C_E2_12 Hours_RNAseq
GSM2112781
Cells_T47D_siNF1C_R5020_12 Hours_RNAseq
GSM2112782
Cells_T47D_siNF1C_E2+R5020_12 Hours_RNAseq
GSM2112783
Cells_T47D_siFOXA1_Vehicle_12 Hours_RNAseq
GSM2112784
Cells_T47D_siFOXA1_E2_12 Hours_RNAseq
GSM2112785
Cells_T47D_siFOXA1_R5020_12 Hours_RNAseq
GSM2112786
Cells_T47D_siFOXA1_E2+R5020_12 Hours_RNAseq
GSM2112787
Cells_T47D(PR-deficient)_Vehicle_12 Hours_RNAseq
GSM2112788
Cells_T47D(PR-deficient)_E2_12 Hours_RNAseq
GSM2112789
Cells_T47D(PR-deficient)_R5020_12 Hours_RNAseq
GSM2112790
Cells_T47D(PR-deficient)_E2+R5020_12 Hours_RNAseq
GSM2112791
Cells_MCF7_Vehicle_12 Hours_RNAseq
GSM2112792
Cells_MCF7_E2_12 Hours_RNAseq
GSM2112793
Cells_MCF7_R5020_12 Hours_RNAseq
GSM2112794
Cells_MCF7_E2+R5020_12 Hours_RNAseq
GSM2112795
T47D_Vehicle_45 mins_PR_ChIP
GSM2112796
T47D_Vehicle_45 mins_ER_ChIP
GSM2112797
T47D_E2_45 mins_PR_ChIP
GSM2112798
T47D_E2_45 mins_ER_ChIP
GSM2112799
T47D_R5020_45 mins_PR_ChIP
GSM2112800
T47D_R5020_45 mins_ER_ChIP
GSM2112801
T47D_E2+R5020_45 mins_PR_ChIP
GSM2112802
T47D_E2+R5020_45 mins_ER_ChIP
GSM2112803
T47D_Vehicle_45 mins_ERPRComplex_reChIP
GSM2112804
T47D_Vehicle_45 mins_ERIgG(Control)_reChIP
GSM2112805
T47D_E2+R5020_45 mins_ERPRComplex_reChIP
GSM2112806
T47D_E2+R5020_45 mins_ERIgG(Control)_reChIP
GSM2112807
T47D(PR-deficient)_Vehicle_45 mins_ER_ChIP
GSM2112808
T47D(PR-deficient)_E2_45 mins_ER_ChIP
GSM2112809
T47D(PR-deficient)_R5020_45 mins_ER_ChIP
GSM2112810
T47D(PR-deficient)_E2+R5020_45 mins_ER_ChIP
GSM2112811
T47D_Vehicle_45 mins_INPUT_ChIP
GSM2112812
T47D_E2_45 mins_INPUT_ChIP
GSM2112813
T47D_R5020_45 mins_INPUT_ChIP
GSM2112814
T47D_E2+R5020_45 mins_INPUT_ChIP
GSM2112815
T47D_Vehicle_45 mins_INPUT_reChIP
GSM2112816
T47D_E2+R5020_45 mins_INPUT_reChIP
GSM2112817
T47D(PR-deficient)_Vehicle_45 mins_INPUT_ChIP
GSM2112818
T47D(PR-deficient)_E2_45 mins_INPUT_ChIP
GSM2112819
T47D(PR-deficient)_R5020_45 mins_INPUT_ChIP
GSM2112820
T47D(PR-deficient)_E2+R5020_45 mins_INPUT_ChIP
This SuperSeries is composed of the following SubSeries:
GSE80365
Genomic agonism and phenotypic antagonism between estrogen and progesterone receptors in breast cancer. [tumor samples RNA-seq]
GSE80366
Genomic agonism and phenotypic antagonism between estrogen and progesterone receptors in breast cancer. [cell models RNA-seq]
GSE80367
Genomic agonism and phenotypic antagonism between estrogen and progesterone receptors in breast cancer. [ChIP-seq]
Relations
BioProject
PRJNA317919
SRA
SRP073061
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary data files not provided
SRA Run Selector
Raw data are available in SRA
Processed data are available on Series record
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