|
| Status |
Public on Sep 07, 2017 |
| Title |
Stochastic Principles Governing Alternative Splicing of RNA |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The goal of the study was to analyze the principles governing the usage of alternatively spliced transcript isoform of four types of T-cells (Naïve, Central Memory, Transitional Memory and Effector Memory) between resting and activated status. However, the principles discovered in the T cells were universal and can also be applied to other cell type and tissues.
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| |
|
| Overall design |
Four types of T cells were sorted and whole transcriptome analysis was performed using an Illumina machine
The readme.txt contains the column headers and description for the processed data files.
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| |
|
| Contributor(s) |
Douek D, Boritz E, Hu J, Wylie W |
| Citation(s) |
28910283 |
| |
| Submission date |
Apr 07, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Jianfei Hu |
| E-mail(s) |
jianfei.hu@mail.nih.gov
|
| Organization name |
NIH
|
| Department |
Vaccine Research Center
|
| Street address |
40 CONVENT DR
|
| City |
BETHESDA |
| State/province |
MD |
| ZIP/Postal code |
20814 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (72)
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| Relations |
| BioProject |
PRJNA317639 |
| SRA |
SRP072980 |
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