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Series GSE79633 Query DataSets for GSE79633
Status Public on Mar 01, 2017
Title Transcriptome of GFP-ZFP36L1 expressing and WT FO B cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: to identify the effects on the transcriptome of overexpressing ZFP36L1 in FO B cells
 
Overall design Method: RNAseq libraries were prepared from RNA isolated from sorted ex-vivo FO B cells. Total RNA samples were sent to Aros Applied Biotechnology A/S and were prepared using the TruSeq Stranded mRNA Sample Prep Kit (Illumina). Libraries were sequenced (100bp paired end) on the Illumina Hiseq.
 
Contributor(s) Newman R, Ahlfors H, Turner M
Citation(s) 28394372
Submission date Mar 26, 2016
Last update date May 15, 2019
Contact name Martin Turner
E-mail(s) martin.turner@babraham.ac.uk
Organization name Babraham Institute
Department Lymphocyte Signalling and Development
Lab Dr. Martin Turner
Street address Babraham Hall
City Cambridge
ZIP/Postal code CB22 3AT
Country United Kingdom
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (8)
GSM2099887 fo1g
GSM2099888 fo2g
GSM2099889 fo3g
Relations
BioProject PRJNA316518
SRA SRP072380

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79633_DESeq2_out_FO_GFP_vs_WT.txt.gz 880.9 Kb (ftp)(http) TXT
GSE79633_Newman_GFP_normData.txt.gz 798.1 Kb (ftp)(http) TXT
GSE79633_Newman_GFP_rawData.txt.gz 385.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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