GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE79615
Query DataSets for GSE79615
Status
Public on Mar 10, 2018
Title
MYD88-dependent dendritic and epithelial cell crosstalk in the lung orchestrates immune responses to inhaled allergens
Organism
Mus musculus
Experiment type
Expression profiling by array
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
29067999
Submission date
Mar 25, 2016
Last update date
May 15, 2019
Contact name
Seddon Thomas
E-mail(s)
sythomas@gmail.com
Organization name
NIEHS
Street address
111 T. W. Alexander Dr.,
City
RTP
State/province
North Carolina
ZIP/Postal code
27709
Country
USA
Platforms (3)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL19964
nCounter Mouse Immunology Panel
GPL20775
[MTA-1_0] Affymetrix Mouse Transcriptome Array 1.0 [transcript (gene) CSV version]
Samples (92)
Less...
More...
GSM2084788
Lung_cDC_CD11c_cre+_MyD88 fx_0h
GSM2084789
Lung_cDC_WT_MyD88 fx_0h
GSM2084790
Lung_cDC_MyD88_KO_0h
GSM2084791
Lung_cDC_SPC_cre+_MyD88 fx_0h
GSM2084792
Lung_cDC_MyD88_KO_6h_OVA_stFLA
GSM2084793
Lung_cDC_SPC_cre+_MyD88 fx_6h_OVA_stFLA
GSM2084794
Lung_cDC_CD11c_cre+_MyD88 fx_6h_OVA_stFLA
GSM2084795
Lung_cDC_WT_MyD88 fx_6h_OVA_stFLA
GSM2098602
Lung_cDC_CD11c_cre+_MyD88 fx_0h_rep1
GSM2098603
Lung_cDC_WT_MyD88 fx_0h_rep1
GSM2098604
Lung_cDC_MyD88_KO_0h_rep1
GSM2098605
Lung_cDC_SPC_cre+_MyD88 fx_0h_rep1
GSM2098606
Lung_cDC_SPC_cre+_MyD88 fx_0h_rep2
GSM2098607
Lung_cDC_MyD88_KO_0h_rep2
GSM2098608
Lung_cDC_WT_MyD88 fx_0h_rep2
GSM2098609
Lung_cDC_CD11c_cre+_MyD88 fx_0h_rep2
GSM2098610
Lung_cDC_MyD88_KO_6h_OVA_stFLA_rep1
GSM2098611
Lung_cDC_SPC_cre+_MyD88 fx_6h_OVA_stFLA_rep1
GSM2098612
Lung_cDC_CD11c_cre+_MyD88 fx_6h_OVA_stFLA_rep1
GSM2098613
Lung_cDC_WT_MyD88 fx_6h_OVA_stFLA_rep1
GSM2098614
Lung_cDC_WT_MyD88 fx_6h_OVA_stFLA_rep2
GSM2098615
Lung_cDC_CD11c_cre+_MyD88 fx_6h_OVA_stFLA_rep2
GSM2098616
Lung_cDC_SPC_cre+_MyD88 fx_6h_OVA_stFLA_rep2
GSM2098617
Lung_cDC_MyD88_KO_6h_OVA_stFLA_rep2
GSM2098784
Lung_AEC_WT_MyD88 fx_2h_rep1
GSM2098785
Lung_AEC_WT_MyD88 fx_2h_rep2
GSM2098786
Lung_AEC_SPC_cre+_MyD88 fx_2h_rep1
GSM2098787
Lung_AEC_SPC_cre+_MyD88 fx_2h_rep2
GSM2098788
Lung_AEC_SPC_cre+_MyD88 fx_2h_rep3
GSM2098789
Lung_AEC_CD11c_cre+_MyD88 fx_2h_rep1
GSM2098790
Lung_AEC_CD11c_cre+_MyD88 fx_2h_rep2
GSM2098791
Lung_AEC_CD11c_cre+_MyD88 fx_2h_rep3
GSM2098792
Lung_AEC_MyD88_KO_2h_rep1
GSM2098793
Lung_AEC_MyD88_KO_2h_rep2
GSM2098794
Lung_AEC_MyD88_KO_2h_rep3
GSM2098795
Lung_AM_WT_MyD88 fx_6h_rep1
GSM2098796
Lung_AM_WT_MyD88 fx_6h_rep2
GSM2098797
Lung_AM_SPC_cre+_MyD88 fx_6h_rep1
GSM2098798
Lung_AM_SPC_cre+_MyD88 fx_6h_rep2
GSM2098799
Lung_AM_CD11c_cre+_MyD88 fx_6h_rep1
GSM2098800
Lung_AM_CD11c_cre+_MyD88 fx_6h_rep2
GSM2098801
Lung_AM_MyD88_KO_6h_rep1
GSM2098802
Lung_AM_MyD88_KO_6h_rep2
GSM2098819
Lung_MyD88_KO_0h_rep2
GSM2098820
Lung_MyD88_KO_0h_rep3
GSM2098821
Lung_MyD88_KO_2h_rep1
GSM2098822
Lung_MyD88_KO_2h_rep2
GSM2098823
Lung_MyD88_KO_2h_rep3
GSM2098824
Lung_MyD88_KO_6h_rep1
GSM2098825
Lung_MyD88_KO_6h_rep2
GSM2098826
Lung_MyD88_KO_6h_rep3
GSM2098827
Lung_WT_MyD88 fx_0h_rep1
GSM2098828
Lung_WT_MyD88 fx_0h_rep2
GSM2098829
Lung_WT_MyD88 fx_0h_rep3
GSM2098830
Lung_WT_MyD88 fx_2h_rep1
GSM2098831
Lung_WT_MyD88 fx_2h_rep2
GSM2098832
Lung_WT_MyD88 fx_2h_rep3
GSM2098833
Lung_WT_MyD88 fx_6h_rep2
GSM2098834
Lung_WT_MyD88 fx_6h_rep3
GSM2098835
Lung_WT_MyD88 fx_6h_rep4
GSM2098836
Lung_SPC_cre+_MyD88 fx_0h_rep1
GSM2098837
Lung_SPC_cre+_MyD88 fx_0h_rep2
GSM2098838
Lung_SPC_cre+_MyD88 fx_0h_rep3
GSM2098839
Lung_SPC_cre+_MyD88 fx_2h_rep1
GSM2098840
Lung_SPC_cre+_MyD88 fx_2h_rep2
GSM2098841
Lung_SPC_cre+_MyD88 fx_2h_rep3
GSM2098842
Lung_SPC_cre+_MyD88 fx_6h_rep1
GSM2098843
Lung_SPC_cre+_MyD88 fx_6h_rep2
GSM2098844
Lung_SPC_cre+_MyD88 fx_6h_rep3
GSM2098845
Lung_CD11c_cre+_MyD88 fx_0h_rep1
GSM2098846
Lung_CD11c_cre+_MyD88 fx_0h_rep2
GSM2098847
Lung_CD11c_cre+_MyD88 fx_0h_rep3
GSM2098848
Lung_CD11c_cre+_MyD88 fx_2h_rep1
GSM2098849
Lung_CD11c_cre+_MyD88 fx_2h_rep2
GSM2098850
Lung_CD11c_cre+_MyD88 fx_2h_rep3
GSM2098851
Lung_CD11c_cre+_MyD88 fx_6h_rep1
GSM2098852
Lung_CD11c_cre+_MyD88 fx_6h_rep2
GSM2098853
Lung_CD11c_cre+_MyD88 fx_6h_rep3
GSM2099010
Lung_cDC_WT_MyD88 fx_6h_OVA_stFLA_rep1
GSM2099011
Lung_cDC_WT_MyD88 fx_6h_OVA_stFLA_rep2
GSM2099012
Lung_cDC_WT_MyD88 fx_6h_OVA_stFLA_rep3
GSM2099013
Lung_cDC_WT_MyD88 fx_6h_OVA_stFLA_rep4
GSM2099014
Lung_cDC_SPC_cre+_MyD88 fx_6h_OVA_stFLA_rep1
GSM2099015
Lung_cDC_SPC_cre+_MyD88 fx_6h_OVA_stFLA_rep2
GSM2099016
Lung_cDC_SPC_cre+_MyD88 fx_6h_OVA_stFLA_rep3
GSM2099017
Lung_cDC_SPC_cre+_MyD88 fx_6h_OVA_stFLA_rep4
GSM2099018
Lung_cDC_CD11c_cre+_MyD88 fx_6h_OVA_stFLA_rep1
GSM2099019
Lung_cDC_CD11c_cre+_MyD88 fx_6h_OVA_stFLA_rep2
GSM2099020
Lung_cDC_CD11c_cre+_MyD88 fx_6h_OVA_stFLA_rep3
GSM2099021
Lung_cDC_MyD88_KO_6h_OVA_stFLA_rep1
GSM2099022
Lung_cDC_MyD88_KO_6h_OVA_stFLA_rep2
GSM2099023
Lung_cDC_MyD88_KO_6h_OVA_stFLA_rep3
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE79062
ATAC-seq of sorted lung cDCs (conventional dendritic cells) from cell-specific MyD88 KO at 0h and 6h in vivo sensitization with OVA/standard flagellin
GSE79581
Array of sorted lung conventional dendritic cells (cDCs) from cell-specific MyD88 KO at 0h and 6h in vivo sensitization with OVA/standard flagellin
GSE79591
Nanostring of sorted airway epithelial cells (AECs) from cell-specific MyD88 KO at 2h after in vivo sensitization with OVA/standard flagellin
GSE79592
Nanostring of sorted lung alveolar macrophages (AM) from cell-specific MyD88 KO at 6h after in vivo sensitization with OVA/standard flagellin
GSE79594
Nanostring of whole lung RNA from cell-specific MyD88 KO at 0h, 2h and 6h after in vivo sensitization with OVA/standard flagellin
GSE79614
Nanostring of sorted lung conventional dendritic cells (cDCs) from cell-specific MyD88 KO at 6h after in vivo sensitization with OVA/standard flagellin
Relations
BioProject
PRJNA316442
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE79615_RAW.tar
400.5 Mb
(http)
(custom)
TAR (of BED, CEL, CHP, RCC)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
Less...
More...