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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 22, 2016 |
| Title |
Gene expression profiling of PBMC from coinfected or non-coinfected mice at d0, d3, d7, and d21 post YFV-17D challenge |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
We tested the effects of co-infection on vaccine response to YFV-17D.
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| Overall design |
Groups of mice were divided into either Mock infected or Co-infected groups. Mock infected were housed in a biohazard facility and inoculated with PBS. Co-infected were infected sequentially with murine gammaherpesvirus-68, murine cytomegalovirus, influenza WSN, and Heligmosimoides polygyrus. Both mock and co-infected groups were challenged with Yellow Fever virus (YFV-17D). Day 0 is prior to YFV. Days 3, 7, and 21 were timepoints after YFV.
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| Contributor(s) |
Bi K, Reese T |
| Citation(s) |
27107939 |
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| Submission date |
Mar 21, 2016 |
| Last update date |
Feb 11, 2019 |
| Contact name |
Kevin Bi |
| E-mail(s) |
kevin_bi@dfci.harvard.edu
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| Organization name |
Dana-Farber Cancer Institute
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| Department |
Pediatric Oncology
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| Lab |
Haining Lab
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| Street address |
450 Brookline Ave.
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02215-5450 |
| Country |
USA |
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| Platforms (1) |
| GPL1261 |
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array |
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| Samples (24)
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| GSM2095715 |
Coinfected d21, batch1 |
| GSM2095716 |
Mock d0, batch1 |
| GSM2095717 |
Mock d3, batch1 |
| GSM2095718 |
Mock d7, batch1 |
| GSM2095719 |
Mock d21, batch1 |
| GSM2095720 |
Coinfected d0, batch2 |
| GSM2095721 |
Coinfected d3, batch2 |
| GSM2095722 |
Coinfected d7, batch2 |
| GSM2095723 |
Coinfected d21, batch2 |
| GSM2095724 |
Mock d0, batch2 |
| GSM2095725 |
Mock d3, batch2 |
| GSM2095726 |
Mock d7, batch2 |
| GSM2095727 |
Mock d21, batch2 |
| GSM2095728 |
Coinfected d0, batch3 |
| GSM2095729 |
Coinfected d3, batch3 |
| GSM2095730 |
Coinfected d7, batch3 |
| GSM2095731 |
Coinfected d21, batch3 |
| GSM2095732 |
Mock d0, batch3 |
| GSM2095733 |
Mock d3, batch3 |
| GSM2095734 |
Mock d7, batch3 |
| GSM2095735 |
Mock d21, batch3 |
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| Relations |
| BioProject |
PRJNA315889 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE79466_RAW.tar |
77.6 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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