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Series GSE79408 Query DataSets for GSE79408
Status Public on Mar 20, 2017
Title Omega-6 and omega-3 oxylipins are implicated in soybean oil-induced obesity
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Soybean oil consumption is increasing worldwide and parallels the obesity epidemic in the U.S. Rich in unsaturated fats, especially linoleic acid, soybean oil is assumed to be healthy, and yet it induces obesity, diabetes, insulin resistance and fatty liver in mice. The genetically modified soybean oil Plenish came on the U.S. market in 2014: it is low in linoleic acid and similar to olive oil in fatty acid composition. Here we show that Plenish induces less obesity than conventional soybean oil: metabolomics, proteomics and a transgenic mouse model implicate oxylipin metabolites of omega-6 and omega-3 fatty acids (linoleic and α-linolenic acid, respectively), which are generated by target genes of nuclear receptor HNF4α. While Plenish induces less insulin resistance than conventional soybean oil, it results in hepatomegaly and liver dysfunction as does olive oil. Altering the fatty acid profile of soybeans could help reduce obesity but may also cause liver complications.
 
Overall design cDNA isolated from livers from WT or α7HMZ mice, were 100bp pair-ended sequenced using Illumina TruSeq RNA Sample Prep v2 Kit
 
Contributor(s) Dhahbi JM, Sladek FM
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Submission date Mar 20, 2016
Last update date May 15, 2019
Contact name joseph M dhahbi
E-mail(s) joseph.dhahbi@cnsu.edu
Phone 9166867891
Organization name California Northstate University College of Medicine
Department Medical Education
Lab Biochemistry
Street address 9700 West Taron Drive
City Elk Grove
State/province ca
ZIP/Postal code 95757
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (12)
GSM2094879 HZ1_pair_1
GSM2094880 HZ1_pair_2
GSM2094881 HZ2_pair_1
Relations
BioProject PRJNA315769
SRA SRP072072

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79408_gene_exp.diff.gz 961.0 Kb (ftp)(http) DIFF
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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