|
| Status |
Public on Mar 12, 2016 |
| Title |
IGF2BP3 controls cancer cell invasiveness by modulation RISC function |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Other
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
The goal of this study was to determine IGF2BP3 regulation of RNA targets in human pacreatic ductal adenocarcinoma cell lines
|
| |
|
| Overall design |
Included are iCLIP-seq libraries for IGF2BP3 from PL45 and Panc1 PDAC cell samples, RIP-seq samples from PL45 and Panc1 PDAC cells, RNA-seq data sets from control and IGF2BP3 knockdown in PL45 and Panc1 PDAC cells, and small RNA-seq samples from Panc1 cells
|
| |
|
| Contributor(s) |
Ennajdaoui H, Howard JM, Katzman S, Sanford JR |
| Citation(s) |
27210763 |
| |
| Submission date |
Mar 11, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Jonathan Michael Howard |
| E-mail(s) |
jomhowar@ucsc.edu
|
| Phone |
(831) 459-2945
|
| Organization name |
University of California-Santa Cruz
|
| Department |
Molecular, Cell, and Developmental Biology
|
| Lab |
Sanford
|
| Street address |
1154 High Street
|
| City |
Santa Cruz |
| State/province |
CA |
| ZIP/Postal code |
95064 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL15520 |
Illumina MiSeq (Homo sapiens) |
|
| Samples (26)
|
|
| Relations |
| BioProject |
PRJNA315017 |
| SRA |
SRP071683 |
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