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Series GSE79080 Query DataSets for GSE79080
Status Public on Mar 01, 2017
Title CpG island methylation profiling of anaplastic gliomas compared to healthy control
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary CpG island methylation profiling of anaplastic gliomas compared to healthy control. Goal was to identify anaplastic glioma-specific differentially methylated regions (DMRs).
 
Overall design Highly methylated DNA from cases and controls was enriched by methyl CpG-immunoprecipitation (MCIp) and co-hybridized. DMRs were defined by stepwise stringent criteria such as selecting top 5% vicinal array probes only. Anaplastic glioma specific DMRs were identified.
 
Contributor(s) Schliesser MG, Wick W
Citation(s) 27880937
Submission date Mar 10, 2016
Last update date Jul 12, 2019
Contact name Maximilian Georg Schliesser
E-mail(s) m.schliesser@dkfz.de
Organization name DKFZ
Street address INF 280
City Heidelberg
ZIP/Postal code 69121
Country Germany
 
Platforms (1)
GPL4126 Agilent-014791 Human CpG Island ChIP-on-Chip Microarray 244K (G4492A) (Feature Number version)
Samples (4)
GSM2084950 anaplastic glioma patient 1
GSM2084951 anaplastic glioma patient 2
GSM2084952 anaplastic glioma patient 3
Relations
BioProject PRJNA314887

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79080_RAW.tar 232.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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