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Series GSE78078 Query DataSets for GSE78078
Status Public on Jun 14, 2016
Title miR-126 Orchestrates an Oncogenic Program in B-Cell Precursor Acute Lymphoblastic Leukemia
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary MicroRNA (miRNA)-126 is a known regulator of hematopoietic stem cell quiescence. We engineered murine hematopoiesis to express miRNA-126 across all differentiation stages. Thirty percent of mice developed monoclonal B cell leukemia, which was prevented or regressed when a tetracycline-repressible miRNA-126 cassette was switched off. Regression was accompanied by upregulation of cell-cycle regulators and B cell differentiation genes, and downregulation of oncogenic signaling pathways. Expression of dominant-negative p53 delayed blast clearance upon miRNA-126 switch-off, highlighting the relevance of p53 inhibition in miRNA-126 addiction. Forced miRNA-126 expression in mouse and human progenitors reduced p53 transcriptional activity through regulation of multiple p53-related targets. miRNA-126 is highly expressed in a subset of human B-ALL, and antagonizing miRNA-126 in ALL xenograft models triggered apoptosis and reduced disease burden.
 
Overall design Study 1: Turning off miR-126 expression from an experimental murine B-ALL in vivo;
Study 2: Modulation of miR-126 expression in human cord blood stem and progenitor cell populations in vitro.
Web link http://www.sciencedirect.com/science/article/pii/S1535610816302124
 
Contributor(s) Garcia-Manteiga JM, Boccalatte FE, Nucera S, Cittaro D, Giustacchini A, Fanciullo C, Plati T, Naldini L, Gentner B
Citation(s) 27300437
Submission date Feb 18, 2016
Last update date May 15, 2019
Contact name Jose Manuel Garcia-Manteiga
E-mail(s) garciamanteiga.josemanuel@hsr.it
Organization name OSR - San Raffaele Scientific Institute
Department Center for Translational Genomics and Bioinformatics
Street address Via Olgettina 58
City Milan
State/province --
ZIP/Postal code 20132
Country Italy
 
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (36)
GSM2066393 huCB stem ctrl_rep1
GSM2066394 huCB stem ctrl_rep2
GSM2066395 huCB stem ctrl_rep3
Relations
BioProject PRJNA312538
SRA SRP070532

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Supplementary file Size Download File type/resource
GSE78078_Processed_file_cd38_negative_kd_oe.xlsx 3.6 Mb (ftp)(http) XLSX
GSE78078_Processed_file_cd38_positive_kd_oe.xlsx 3.6 Mb (ftp)(http) XLSX
GSE78078_Processed_file_murine_leukemic_blasts.xlsx 2.4 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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