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| Status |
Public on Sep 22, 2016 |
| Title |
Genome-wide expression profile in Fh1-competent vs Fh1-deficient mouse kidney cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Comparison of the transcriptome of immortalised mouse kidney epithelial cells either wt for Fh1 or Fh1-deficient. The cells were isolated from kidneys of P5 mouse(see Frezza et al, Nature 2011). Briefly, Fh1_fl (flox) are wt for Fh1 (floxed cassette not excised), clone 1 and clone 19 are two different Fh1-deificent clones (floxed cassette excised) and Rec are clone 19 with reconstituted Fh1 expression from exogenous plasmid.
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| |
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| Overall design |
Examination of gene transciption in 4 cell types.
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| |
|
| Contributor(s) |
Zecchini V, Frezza C |
| Citation(s) |
27580029 |
| |
| Submission date |
Feb 03, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Chandra Chilamakuri |
| E-mail(s) |
datasubmissions@cruk.cam.ac.uk
|
| Organization name |
Cancer Research UK Cambridge Institute
|
| Street address |
Robinson Way
|
| City |
Cambridge |
| ZIP/Postal code |
CB2 0RE |
| Country |
United Kingdom |
| |
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| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (20)
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| This SubSeries is part of SuperSeries: |
| GSE77542 |
Genome-wide expression profile in FH-deficient vs FH-competent cells |
|
| Relations |
| BioProject |
PRJNA310750 |
| SRA |
SRP069245 |
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