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Series GSE77175 Query DataSets for GSE77175
Status Public on Jun 12, 2017
Title PARP1 expression drives the synergy between trabectedin and PARP1 inhibitors
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary Trabectedin is a DNA-damaging agent with a peculiar mechanism of action; it traps the DNA repair machinery leading to DNA single- and double-strand breaks, particularly in BRCA1/2-deficient tumors. We hypothesized that trabectedin-induced DNA damage might activate PARP1 (a DNA-repair machinery key player), and consequently, PARP1 inhibition would perpetuate trabectedin-induced DNA damage. In several tumor histotypes, we demonstrated a different degree of synergism between trabectedin and PARP1 inhibitors (PARP1-Is). Independent of BRCA1/2 status, PARP1 expression dictated the degree of synergism. Namely, silenced PARP1 reduced trabectedin-PARP1-Is synergism, whereas overexpressed PARP1 increased combination efficacy. High-PARP1 expression and specific gene signatures associated with DNA damage response and repair (DDR-R) were predictive of trabectedin+PARP1-I synergy. These findings pave the way for the clinical development of this novel combination therapy, as well as evaluation of PARP1 expression and DDR-R signatures in tumor samples as predictive biomarkers of response
 
Overall design A first panel of bone and soft tissue sarcoma cell lines were analyzed in terms of response and sensitivity to trabectedin and olaparib combination. A group of cells displaying high synergism of the combination was then compared with a group of cells with low synergism of the combination. Validation of PARP1 role was then performed in a second panel of non sarcoma cells ( mesotheliomas, colon breast, prostate, cholangio and lung carcinomas)
 
Contributor(s) Pignochino Y, Capozzi F, D'Ambrosio L, Dell'Aglio C, Basiricò M, Canta M, Aliberti S, Palesandro E, Boccone P, Ostano P,  Gregnanin I, Galizia D, Gammaitoni L, Sangiolo D, Lorenzato A, Lutati FV, Benassi MS, Chiorino G, Pasini B, Aglietta M, Grignani G
Citation(s) 28454547
Submission date Jan 25, 2016
Last update date Jun 12, 2017
Contact name giovanna chiorino
E-mail(s) giovanna.chiorino@gmail.com
Organization name Fondo Edo Tempia
Department Cancer Genomics
Street address via malta 3
City Biella
ZIP/Postal code 13900
Country Italy
 
Platforms (1)
GPL16237 Agilent-030587 CCMC CGH plus SNP 180k Microarray
Samples (8)
GSM2045555 TC106
GSM2045556 402.91
GSM2045557 DMR
Relations
BioProject PRJNA309661

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77175_RAW.tar 396.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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