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Series GSE77031 Query DataSets for GSE77031
Status Public on Aug 30, 2016
Title Double-stranded RNA sequencing of HCT116 cells with 5-Aza-CdR and combination treatment compared to untreated cells
Organism Homo sapiens
Experiment type Other
Summary double stranded RNA was prepared using J2 antibody pull-down
Overall design Examination of double stranded RNA expressed after cells with 5-Aza-CdR and combination treatment compared to untreated cells
Contributor(s) Liu M, Jones PA
Citation(s) 27573823
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 CA082422 Mechanisms of De Novo Methylation in Cancer VAN ANDEL RESEARCH INSTITUTE JONES
Submission date Jan 20, 2016
Last update date May 15, 2019
Contact name Peter A Jones
Organization name Van Andel Research Institute
Department Center for Epigenetics
Lab Jones Lab
Street address 333 Bostwick Ave
City Grand Rapids
State/province MI
ZIP/Postal code 49503
Country USA
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (7)
GSM2042801 HCT116_J2_PBS
GSM2042802 HCT116_J2_Aza
GSM2042803 HCT116_J2_Combo
BioProject PRJNA309304
SRA SRP068674

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Supplementary file Size Download File type/resource
GSE77031_20160114_JonesLabVAI_J2RNAseq_ERVcnt.xlsx 34.3 Mb (ftp)(http) XLSX
GSE77031_J2-RNAseq-ERVconts-MarkDuplicates.xlsx 27.8 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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