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| Status |
Public on Aug 23, 2017 |
| Title |
Transcriptional profiling through RNA-seq of zebrafish larval liver after exposure to biliatresone, a biliary toxin. |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We sequenced liver mRNA isolated from biliatresone-treated zebrafish larvae and DMSO-treated controls in order to elucidate the molecular pathways induced by biliatresone, a biliary toxin that is responsible for outbreaks of biliary atresia in Australian liverstock.
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| |
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| Overall design |
Liver mRNA profiles of biliatresone-treated zebrafish larvae and DMSO-treated controls were generated by deep sequencing, in duplicates.
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| |
|
| Contributor(s) |
Zhao X, Pack M |
| Citation(s) |
27102575 |
| |
| Submission date |
Jan 12, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Xiao Zhao |
| E-mail(s) |
Xiao.Zhao@uphs.upenn.edu
|
| Organization name |
University of Pennsylvania
|
| Department |
Medicine/DIgestive Diseases
|
| Lab |
Michael Pack
|
| Street address |
411 Curie Blvd, Rm 1126
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL14875 |
Illumina HiSeq 2000 (Danio rerio) |
|
| Samples (4)
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| Relations |
| BioProject |
PRJNA308582 |
| SRA |
SRP068364 |
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