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| Status |
Public on Nov 09, 2015 |
| Title |
Transcriptome profiling of Lactococcus lactis subsp. cremoris CECT 8666 in response to agmatine |
| Platform organism |
Lactococcus cremoris subsp. cremoris GE214 |
| Sample organism |
Lactococcus cremoris |
| Experiment type |
Expression profiling by array
|
| Summary |
The goal was to determine the effect of agmatine on the trancriptional profile of L. lactis CECT 8666 strain. For that we compared the expression profile of L. lactis CECT 8666 cells grown in culture medium supplemented with 20 mM agmatine with the expression profile of L. lactis CECT 8666 cells grown in culture medium without agmatine.
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| Overall design |
L. lactis CECT 8666 cells grown in GalM17 medium (reference) compared to L. lactis CECT 8666 cells grown in GalM17 medium supplemented with 20 mM agmatine (test).
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| Contributor(s) |
del Rio B, Ladero V, Linares DM, Redruello B, de Jong A, Kuipers OP, Fernandez M, Martin MC, Alvarez MA |
| Citation(s) |
26981381 |
| |
| Submission date |
Nov 09, 2015 |
| Last update date |
Mar 22, 2016 |
| Contact name |
Beatriz del Rio |
| E-mail(s) |
beadelrio@ipla.csic.es
|
| Phone |
+34- 985 892131
|
| Organization name |
Instituto de Productos Lacteos de Asturias (IPLA-CSIC)
|
| Department |
Technology and Biotechnology of Dairy Products
|
| Lab |
Molecular Microbiology
|
| Street address |
Paseo Rio Linares s/n
|
| City |
Villaviciosa |
| State/province |
Asturias |
| ZIP/Postal code |
33300 |
| Country |
Spain |
| |
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| Platforms (1) |
| GPL18969 |
Agilent-040255 Lactococcus lactis subsp. cremoris GE214 array (Feature number version) |
|
| Samples (5)
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| GSM1933949 |
CECT 8666 + Agm (test) compared to CECT 8666 (reference) Replicate 1 |
| GSM1933950 |
CECT 8666 + Agm (test) compared to CECT 8666 (reference) Replicate 2 |
| GSM1933951 |
CECT 8666 + Agm (test) compared to CECT 8666 (reference) Replicate 3 |
| GSM1933952 |
CECT 8666 + Agm (test) compared to CECT 8666 (reference) Replicate 4 |
| GSM1933953 |
CECT 8666 + Agm (test) compared to CECT 8666 (reference) Replicate 5 |
|
| Relations |
| BioProject |
PRJNA301596 |
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