|
| Status |
Public on Jan 12, 2016 |
| Title |
RNA-seq of Mesp1-induced cardiopharyngeal mesoderm derivatives from ES cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We have developed a protocol to generate cardiopharyngeal mesoderm (CPM) in vitro by Mesp1 induction in ES cells. The goal of this study is to compare the transcriptome of CPM-derived cardiac and skeletal myogenic progenitors to identify novel lineage-specific markers.
|
| |
|
| Overall design |
mRNA profiles of CPM-derived D6 (early) and D12 (late), cardiac (BMP) and skeletal myogenic (control) progenitors were generated
|
| |
|
| Contributor(s) |
Chan SS, Kyba M, Swanson SA, Stewart R, Thomson JA |
| Citation(s) |
26771351 |
| |
| Submission date |
Nov 04, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Sunny Sun-Kin Chan |
| E-mail(s) |
sschan@umn.edu
|
| Phone |
6126252173
|
| Organization name |
University of Minnesota
|
| Department |
Pediatrics
|
| Street address |
CCRB 4-133, 2231 6th St SE
|
| City |
Minneapolis |
| State/province |
MN |
| ZIP/Postal code |
55455 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (12)
|
|
| Relations |
| BioProject |
PRJNA301152 |
| SRA |
SRP065803 |
Less...
More...