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| Status |
Public on Sep 12, 2016 |
| Title |
The whole transcriptome analysis in a replicative senescence model. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
RNA-Seq was performed to screen transcripts in whole lyastes or mitoplast fraction prepared from young and senescent WI-38 human fibroblast
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| Overall design |
A whole or mitoplast RNA was extracted from both young and senescent WI-38 cells, and used for RNA-Seq.
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| Contributor(s) |
Noh JH, Kim KM, Abdelmohsen K, Yoon J, Panda AC, Munk R, Kim J, Curtis J, Moad CA, Indig FE, de Paula W, Dudekula DB, De S, Yang X, Martindale JL, de Cabo R, Gorospe M |
| Citation(s) |
27198227 |
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| Submission date |
Sep 25, 2015 |
| Last update date |
Jun 22, 2020 |
| Contact name |
Supriyo De |
| Organization name |
NIA-IRP, NIH
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| Department |
Laboratory of Genetics and Genomics
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| Lab |
Computational Biology & Genomics Core
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| Street address |
251 Bayview Blvd
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| City |
Baltimore |
| State/province |
Maryland |
| ZIP/Postal code |
21224 |
| Country |
USA |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA297055 |
| SRA |
SRP064207 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE73458_RAW.tar |
11.3 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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