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| Status |
Public on Sep 25, 2015 |
| Title |
The Candida albicans Histone Acetyltransferase Hat1 Regulates Stress Resistance and Virulence via Distinct Chromatin Assembly Pathways |
| Organism |
Candida albicans |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Transcriptome analysis of wild type, Hat1-deficient, Cac2-deficient and Rtt109-deficient Candida albicans cells prior to and after treatment with hydrogen was done to determine the transcriptional changes in these three mutatns in logarithmically growing cells as well as under oxidative stress conditions.
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| Overall design |
RNA Sequencing was performed of wild type, Hat1-deficient, Cac2-deficient and Rtt109-deficient Candida albicans strains prior to and after treatment with hydrogen peroxide. Cells were grown to the exponential phase in YPD at 30oC. Aliquots were harvested for RNA isolation and to the remaining culture hydrogen eproxide was added to a final concentration of 1.6 mM. After 30 min incubation at 30°C cells were harvested for RNA isolation. Five biological replicates were done for the wild type and Hat1-deficient cells and three biological replicates were done for Cac2-deficient and Rtt109-deficient strains.
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| Contributor(s) |
Tscherner M |
| Citation(s) |
26473952 |
| |
| Submission date |
Sep 24, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Michael Tscherner |
| Organization name |
Medical University of Vienna
|
| Department |
Max F. Perutz Laboratories, Department for Medical Biochemistry
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| Lab |
Kuchler
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| Street address |
Dr. Bohr Gasse 9/2
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| City |
Vienna |
| ZIP/Postal code |
A-1030 |
| Country |
Austria |
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| Platforms (1) |
| GPL15645 |
Illumina HiSeq 2000 (Candida albicans) |
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| Samples (32)
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| Relations |
| BioProject |
PRJNA296914 |
| SRA |
SRP064163 |
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