|
| Status |
Public on Jan 26, 2016 |
| Title |
Gene expression analysis of BRD4 knockdown in HT-29 and HCT116 cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNAseq is performed (50bp single end reads) on HT-29 and HCT-116 cell lines utilizing two independent shRNAs against BRD4 and a non-targeting control shRNA (NTC)
|
| |
|
| Overall design |
Examination of transcriptomic changes after knockdown of BRD4
|
| |
|
| Contributor(s) |
Firestein R, McCleland M |
| Citation(s) |
26752646 |
| |
| Submission date |
Sep 22, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Florian Gnad |
| Organization name |
Genentech
|
| Street address |
1 DNA Way
|
| City |
South San Francisco |
| ZIP/Postal code |
94080 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (18)
|
|
| Relations |
| BioProject |
PRJNA296593 |
| SRA |
SRP063978 |
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