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Series GSE73146 Query DataSets for GSE73146
Status Public on Sep 18, 2015
Title Gene expression over the course of xylem tracheary element formation in cell suspension cultures of Arabidopsis thaliana
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Transcriptomic analysis of gene expression during the differentiation of cell suspension cultures into tracheary elements using the biological system published by Pesquet et al., Current Biology (2010): tracheary element differentiation was triggered by externally supplying hormone-free habituated cell suspension cultures of Arabidopsis thaliana Col-0 with auxin, cytokinin and epibrassinolides; RNA samples extracted from 3 independent time-courses every 12h from 0h to 4 days were analyzed using ATH1 Arabidopsis Affymetrix micro-array
 
Overall design Time-course design during tracheary element differentiation (3 independepent time-course were harvested from initiation 0h to 4 days every 12h) - total of 27 samples corresponding to the 3 replicates of 9 time point time-courses - gene expression was monitored along the time-course compared to 0h
 
Contributor(s) Pesquet E
Citation(s) 26432860, 36449969
Submission date Sep 17, 2015
Last update date Mar 15, 2023
Contact name Edouard Pesquet
E-mail(s) edouard.pesquet@plantphys.umu.se
Organization name Umeå Plant Science Centre
Department Department of Plant Physiology
Street address Umeå University
City Umeå
ZIP/Postal code SE 90187
Country Sweden
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (27)
GSM1887741 Cell culture time-point at 0h - biological rep A
GSM1887742 Cell culture time-point at 12h - biological rep A
GSM1887743 Cell culture time-point at 24h - biological rep A
Relations
BioProject PRJNA296068

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE73146_RAW.tar 37.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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