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| Status |
Public on Sep 18, 2015 |
| Title |
MicroRNA profiling of chronic lung disease for the Lung Genomics Research Consortium |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by array
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| Summary |
These subjects were diagnosed as being controls or having interstitial lung disease (ILD) or chronic obstructive pulmonary disease (COPD) as determined by clinical history, CT scan, and surgical pathology. There was no intervention, these are cross-sectional data. All samples are from the Lung Tissue Research Consortium (LTRC) and are indexed by their LTRC tissue label.
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| Overall design |
These are 319 total subjects, 183 have ILD and 136 have COPD, who went for surgery for the investigation of a nodule and have no chronic lung disease by CT or pathology. Each sample is total RNA extracted from flash frozen human whole lung homogenate. Between the two platforms were analyzed. Samples are titled by source (LT=LTRC), 6-digit tissue label, lobe of extraction, and major disease state.
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| Contributor(s) |
Kaminski N, Tedrow J, Guardela BJ, Schwartz DA |
| Citation(s) |
26560100 |
| |
| Submission date |
Sep 11, 2015 |
| Last update date |
Jun 07, 2019 |
| Contact name |
SungHwan Kim |
| Organization name |
University of Pittsburgh
|
| Street address |
200 Lothrop, BST W1200
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| City |
Pittsburgh |
| ZIP/Postal code |
15213 |
| Country |
USA |
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| Platforms (2) |
| GPL16770 |
Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray (miRBase release 16.0 miRNA ID version) |
| GPL20907 |
Agilent-021827 Human miRNA Microarray [miRBase release 14 miRNA ID version] |
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| Samples (319)
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| Relations |
| BioProject |
PRJNA295438 |
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