|
| Status |
Public on Sep 16, 2015 |
| Title |
Ro60-knockout cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq of Ro60-null GM12878 cell lines in order to determine the gene expression changes resulting from loss of Ro60.
|
| |
|
| Overall design |
3 separate clones of Ro60(Trove2)-null cells derived from zinc finger nuclease targeting of exon 2, two wildtype biological replicates, +/- IFNa for 6 hours.
|
| |
|
| Contributor(s) |
Hung T, Behrens T |
| Citation(s) |
26382853 |
| |
| Submission date |
Aug 28, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Tiffany hung |
| E-mail(s) |
tiffanyh@gmail.com
|
| Organization name |
Genentech
|
| Department |
Human Genetics
|
| Lab |
Tim Behrens
|
| Street address |
1 DNA Way
|
| City |
South San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94110 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (10)
|
|
| This SubSeries is part of SuperSeries: |
| GSE72420 |
The Ro60 Autoantigen Binds Endogenous Retroelements and Regulates Inflammatory Gene Expression |
|
| Relations |
| BioProject |
PRJNA294174 |
| SRA |
SRP062956 |
Less...
More...