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Series GSE72321 Query DataSets for GSE72321
Status Public on Sep 24, 2015
Title Engrailed homeoprotein protects mesencephalic dopaminergic neurons from oxidative stress
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Engrailed homeoproteins are expressed in adult dopaminergic neurons of the substantia nigra. In Engrailed1 heterozygous mice, these neurons start dying at 6 weeks, are more sensitive to oxidative stress and progressively develop traits similar to those observed following an acute and strong oxidative stress inflected to wild-type neurons. These changes include DNA strand breaks and the modification (intensity and distribution) of several nuclear and nucleolar heterochromatin marks. Engrailed1 and Engrailed2 are biochemically equivalent transducing proteins previously used to antagonize dopaminergic neuron death in Engrailed heterozygous mice and in mouse models of Parkinson disease. Accordingly, we show that, following an acute oxidative stress, a single Engrailed2 injection restores all nuclear and nucleolar heterochromatin marks, decreases the number of DNA strand breaks and protects dopaminergic neurons against apoptosis.
 
Overall design RNA-seq data for differentially expressed genes in the SNpc of En1+/- mice, En2 infused mice and 6-OHDA/En2 injection experiments.
 
Contributor(s) Rekaik H, Blaudin de Thé F, Fuchs J, Massiani-Beaudoin O, Prochiantz A, Joshi RL
Citation(s) 26411690
Submission date Aug 24, 2015
Last update date May 15, 2019
Contact name Hocine Rekaik
E-mail(s) hocine.rekaik@college-de-france.fr
Phone 0033144271515
Organization name College de France
Department CIRB
Street address 11, Place Marcelin Berthelot
City Paris
ZIP/Postal code 75005
Country France
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM1859948 Wt SNpc
GSM1859949 En1+/- SNpc
GSM1859950 En2 infusion contra SNpc
Relations
BioProject PRJNA293745
SRA SRP062789

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Supplementary file Size Download File type/resource
GSE72321_RAW.tar 26.9 Mb (http)(custom) TAR (of XLSX)
GSE72321_annotated_diffana_6-OHDA-6-OHDA_En.xlsx 3.0 Mb (ftp)(http) XLSX
GSE72321_annotated_diffana_gain-of-function_En1-ipsi-contra.xlsx 9.9 Mb (ftp)(http) XLSX
GSE72321_annotated_diffana_loss-of-function_En1LacZ-WT.xlsx 9.1 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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