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Series GSE72215 Query DataSets for GSE72215
Status Public on Aug 20, 2015
Title Real-time quantitative PCR analysis of tomato bZIP genes under biotic stress and plant hormone treatments
Organism Solanum lycopersicum
Experiment type Expression profiling by RT-PCR
Summary We used Bio-Rad laboratories, lnc. PCR assay panel to analyze expression levels of bZIP genes in various biotci stress and plant hormone treatments. Tomato (Solanum lycopersicum) cv. Suhong 2003 were reared in growth chambers at 24 ± 1 °C with a photoperiod of 14 h light/10 h dark and light intensity of 200 μE m2 s-1. For analysis of gene expression, 4-week-old tomato plants were treated by foliar spraying with 100 μM methyl jasmonate (MeJA), 100 μM 1-amino cyclopropane-1-carboxylic acid (ACC), 100 μM SA or 0.1% ethanol as a control and samples were collected at indicated time points after treatment. For analysis of gene expression in response to pathogen infection, whole plant inoculation assays for B. cinerea (spore density of 1×10 5 spores/mL) and vacuum infiltrated inoculation assays for Pst DC3000 along with corresponding mock inoculation controls were performed.
 
Overall design The experiment was designed to gain insight into the temporal and spatial transcription patterns of 59 bZIP genes in tomato.The experiment was designed to examine the transcription patterns of 59 bZIP genes in tomato in response to two different biotic stresses (Botrytis cinerea, Pst DC3000) and three (SA, MeJA and ACC) plant hormone treatments.
 
Contributor(s) Li DY, Fu FY, Zhang HJ, Song FM
Citation(s) 26459863
Submission date Aug 19, 2015
Last update date Nov 19, 2015
Contact name Dayong Li
E-mail(s) dyli@zju.edu.cn
Phone 13757190327
Organization name Zhejiang University
Department Institute of Biotechnology
Lab State Key Laboratory of Rice Biology
Street address 866 Yuhangtang Rd
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310058
Country China
 
Platforms (1)
GPL20829 Bio-rad Solanum lycopersicum
Samples (13)
GSM1857754 SA-0h
GSM1857755 SA-12h
GSM1857756 SA-24h
Relations
BioProject PRJNA293376

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE72215_fold-change.txt.gz 3.7 Kb (ftp)(http) TXT
GSE72215_non-normalized.txt.gz 4.8 Kb (ftp)(http) TXT
GSE72215_normalized.txt.gz 5.4 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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