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Series GSE71756 Query DataSets for GSE71756
Status Public on Aug 15, 2016
Title microRNA suppresses prostate cancer stem cells and metastasis by inhibiting a cohort of pro-metastasis targets including CD44, Rho GTPases and EZH2
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary microRNA plays important roles in tumor initiation and progression. Here we showed that, one of the miR-200 family member, miR-141 is drastically under-expressed in several prostate cancer stem cell populations in both xenograft and primary patient samples. Enforced expression of miR-141 in CD44+ PCa cells suppressed tumor initation and metastasis. Cancer stem cell related properties including clonal and sphere formation ability as well as migration and invasion abilites were blocked by miR-141. Moreover, under-expression of miR-141 in prostate cancer stem cells is important in maintaining a partial mesenchymal status. Whole genome sequencing revealed novel pathways that are regulated by miR-141 including Rho GTPase signaling pathway. Stem cell related molecules including CD44 and EZH2 are also validated as direct targets of miR-141 mediating the tumor and metastasis suppressive function. Altogether, these data suggests that on e signal miRNA, miR-141 could utilize multiple mechanisms to obstruct tumor progression and metstasiss.
 
Overall design Total transcriptome profiles of prostate cancer cells Du145 and LAPC9 transfected with 30nM miR-141 mimicking oligonucleotides or negative control (NC) oligonucleotides were generated by deep sequencing, in duplicates, using Illumina HiSeq 2000.
 
Contributor(s) Liu C, Lu Y, Tang D
Citation(s) 28112170
Submission date Aug 05, 2015
Last update date Sep 27, 2019
Contact name Liu Can
E-mail(s) canliu@mdanderson.org
Organization name The University of Texas MD Anderson Cancer Center
Department Department of Epigenetics and Molecular Carcinogenesis
Street address 1808 Park Road 1C
City Smithville
State/province Texas
ZIP/Postal code 78957
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (7)
GSM1844649 Du145 NC rep1
GSM1844650 Du145 NC rep2
GSM1844651 Du145 miR-141 rep1
Relations
BioProject PRJNA292016
SRA SRP062068

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE71756_RAW.tar 660.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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