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Series GSE70844 Query DataSets for GSE70844
Status Public on Dec 21, 2015
Title Single-cell RNA sequencing of aspirates from cortical neurons after patch clamp recording
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We obtained full transcriptome data from single cortical neurons after whole-cell patch-clamp recording (termed “Patch-seq”). By applying “Patch-seq” to cortical neurons, we reveal a close link between biophysical membrane properties and genes coding for neurotransmitter receptors and channels, including well-established and hitherto undescribed subtypes.
 
Overall design RNA sequencing was performed on a total of 83 individual cells
 
Contributor(s) Janos F, Amit Z, Sten L, Tibor H
Citation(s) 26689544
Submission date Jul 13, 2015
Last update date May 15, 2019
Contact name Sten Linnarsson
Organization name Karolinska Institutet
Department Medical Biochemistry and Biophysics
Lab Molecular Neurobiology
Street address Scheeles väg 1
City Stockholm
ZIP/Postal code 171 65
Country Sweden
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (83)
GSM1820357 Run283_L4_A03_single cell
GSM1820358 Run283_L4_C01_single cell
GSM1820359 Run283_L4_C03_single cell
Relations
BioProject PRJNA289674
SRA SRP060744

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70844_Fuzik_et_al_molcounts.xls.gz 798.7 Kb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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