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Series GSE70485 Query DataSets for GSE70485
Status Public on Feb 10, 2016
Title m1A marks translation initiation sites in human and mouse messenger RNA [Sequencing]
Organisms Schizosaccharomyces pombe; Saccharomyces cerevisiae; Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We developed a novel approach, m1A-seq, for high-resolution mapping of the transcriptome-wide m1A landscape, based on antibody-mediated capture followed by massively parallel sequencing
Overall design Identification of m1A modified sequences in human, mouse and yeast cell lines
Contributor(s) Dominissini D, Moshitch-Moshkovitz S, He C, Rechavi G
Citation(s) 26863196
Submission date Jul 02, 2015
Last update date May 15, 2019
Contact name Sharon Moshitch-Moshkovitz
Organization name Sheba Medical Center
Department Cancer Research Center
Street address Laboratory wing
City Tel-Hashomer
ZIP/Postal code 52621
Country Israel
Platforms (4)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (56)
GSM1782888 HeLa mRNA IP replicate A
GSM1782889 HeLa mRNA input replicate A
GSM1782890 HeLa mRNA IP replicate B
This SubSeries is part of SuperSeries:
GSE76058 m1A marks translation initiation sites in human and mouse messenger RNA
BioProject PRJNA288805
SRA SRP060246

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70485_PARSseq_RPKM_table.txt.gz 759.4 Kb (ftp)(http) TXT
GSE70485_human_peaks.txt.gz 249.8 Kb (ftp)(http) TXT
GSE70485_mouse_peaks.txt.gz 39.7 Kb (ftp)(http) TXT
GSE70485_yeast_peaks.txt.gz 19.2 Kb (ftp)(http) TXT
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