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Series GSE70466 Query DataSets for GSE70466
Status Public on Sep 01, 2018
Title Replicated transcriptome profiling of Normal and Cancerous Prostate Cells [RNA-Seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To identify differentially expressed transcripts in Cancer and Normal Prostate cells global transcript abundance was assayed by replicated (n=3) stranded RNA-Sequencing
Overall design PolyA+ RNA profiles of LNCaP (n=3) and PrEC (n=3) cell lines were generated by deep sequencing. Libraries were generated by Illumina TruSeq kits (maintaining strand information). The resultant cDNA libraries were sequenced at the Kinghorn Center for Clinical Genomics (The Garvan Institute of Medical Research, Darlinghurst, NSW, Australia) using the Illumina HiSeq 2500 platform.
Contributor(s) French HJ, Gould K, Clark S, Valdes Mora F, Song JZ, Skulte K
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Submission date Jul 02, 2015
Last update date May 15, 2019
Contact name Timothy John Peters
Phone +61292958325
Organization name Garvan Institute of Medical Research
Department Immunology
Lab Immunogenomics
Street address 384 Victoria St
City Darlinghurst
State/province NSW
ZIP/Postal code 2010
Country Australia
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM1778901 LNCaP_1_GRCh37_74
GSM1778903 LNCaP_2_GRCh37_74
GSM1778904 LNCaP_3_GRCh37_74
This SubSeries is part of SuperSeries:
GSE62410 Transcriptome profiling of Normal and Cancerous Prostate Cells
BioProject PRJNA288751
SRA SRP060235

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70466_tpm_GRCh37_74.csv.gz 2.8 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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