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Series GSE70375 Query DataSets for GSE70375
Status Public on Jul 20, 2015
Title Whole genome tomato transcriptional response to tomato-adapted and non-adapted Tetranychus urticae herbivory
Organism Solanum lycopersicum
Experiment type Expression profiling by array
Summary Generalist arthropod herbivores rapidly adapt to a broad range of host plants. However, the extent of transcriptional reprogramming in the herbivore and its hosts associated with adaptation remains poorly understood. Using the spider mite Tetranychus urticae and tomato as models with available genomic resources, we investigated the reciprocal genome-wide transcriptional changes in both spider mite and tomato as a consequence of mite’s adaptation to tomato
We used microarray to assess global gene expression in Solanum lycopersicum cv. Moneymaker upon Tetranychus urticae attack by tomato-adapted and non-adapted spider mite lines.
 
Overall design 1 month old tomato plants were subjected to Tetranychus urticae attack through application of 100 adult mites on a terminal leaflet of leaves 3 and 4 for 24 hours (200 mites per plant).
 
Contributor(s) Zhurov V, Martel C, Wybouw N, Van Leeuwen T, Grbic V
Citation(s) 26211543, 37437113
Submission date Jun 29, 2015
Last update date Aug 09, 2023
Contact name Vladimir Zhurov
E-mail(s) vzhurov2@uwo.ca
Organization name University of Western Ontario
Department Biology
Street address 1151 Richmond Street
City London
State/province ON
ZIP/Postal code N6A5B7
Country Canada
 
Platforms (1)
GPL16358 Affymetrix EUTOM3 tomato exon array [CDF: EUTOM3_exon]
Samples (20)
GSM1726205 NT_A
GSM1726206 NT_B
GSM1726207 LND_A
Relations
BioProject PRJNA288470

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70375_RAW.tar 185.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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