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| Status |
Public on Nov 01, 2017 |
| Title |
Transcriptomic profiling of BRC+, BRC-, DRC+ and DRC- FACS-sorted samples |
| Organism |
Staphylococcus aureus subsp. aureus str. Newman |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
BRcells and DRcells show distinct transcriptomic profiles. We assessed transcriptome changes, by deep-sequencing, of different subpopulations of Staphylococcus aureus strain Newman from multicellular aggregates.
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| |
|
| Overall design |
Transcriptmic profiles of [Pica-yfp and Ppsma-yfp labeled-strains samples belonging to high and low-fluorescence populations sorted by FACS] were generated by deep sequencing, using Illumina HiSeq 2500.
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| |
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| Contributor(s) |
Lopez D, Garcia-Betancur JC, Sharan M |
| Citation(s) |
28893374 |
| |
| Submission date |
Jun 12, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Konrad U. Förstner |
| E-mail(s) |
foerstner@zbmed.de
|
| Organization name |
ZB MED - Information Centre for Life Sciences
|
| Department |
Information Services
|
| Lab |
Förstner Lab
|
| Street address |
Gleueler Str. 60
|
| City |
Cologne |
| State/province |
North Rhine-Westphalia |
| ZIP/Postal code |
50931 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL20326 |
Illumina HiSeq 2500 (Staphylococcus aureus subsp. aureus str. Newman) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA286888 |
| SRA |
SRP059442 |
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