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Series GSE69556 Query DataSets for GSE69556
Status Public on Jan 05, 2016
Title Next Generation Sequencing of PKD2 mutant mice kidneys
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary This Study sought to understand the differential gene expression profile of Pkd2 mutant mice kidneys in the setting of miR-21 deletion
Overall design 4 Wild type mice, 3 Pkd2 Knockout mice and 3 Pkd2-miR-21 knockout mice were analyzed
Contributor(s) Lakhia R, Patel V
Citation(s) 26677864
Submission date Jun 04, 2015
Last update date May 15, 2019
Contact name Ronak Lakhia
Organization name UTSW
Street address 5323 Harry Hines
City Dallas
State/province Texas
ZIP/Postal code 75390
Country USA
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (10)
GSM1703876 WT-66
GSM1703877 WT-81
GSM1703878 WT-326
BioProject PRJNA285844
SRA SRP059062

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69556_cds_exp.diff.gz 3.0 Mb (ftp)(http) DIFF
GSE69556_comprehensive_transcript_assembly_counts_DM-VS-SM.glmLRT.txt.gz 995.4 Kb (ftp)(http) TXT
GSE69556_comprehensive_transcript_assembly_counts_DM-VS-WT.glmLRT.txt.gz 1.1 Mb (ftp)(http) TXT
GSE69556_comprehensive_transcript_assembly_counts_SM-VS-WT.glmLRT.txt.gz 1.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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