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Series GSE69479 Query DataSets for GSE69479
Status Public on Feb 02, 2016
Title Genome-wide map of SOX2 occupancy in human ES cells (hESCs) and hESC derived neural progenitor cells (hNPCs)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To compare the genome wide binding profiles of SOX2 in hESCs and hNPCs, we carried out SOX2 ChIP-seq in the two cell types and dissected the the cell type and stage dependent regulatory groups of SOX2, thus providing important information for the mechanism underlying SOX2's dynamic functions in hESCs and hNPCs.
Overall design Comparative analysis of SOX2 genome-wide occupancy in hESCs and hNPCs
Contributor(s) Zhou C, Jin Y
Citation(s) 26809499
Submission date Jun 02, 2015
Last update date May 15, 2019
Contact name Ying Jin
Organization name Institute of Health Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
Street address 225 South Chongqing Road
City Shanghai
ZIP/Postal code 200025
Country China
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM1701825 hESC SOX2 ChIP-Seq
GSM1701826 hESC POI II ChIP-seq
GSM1701827 hESC Input
BioProject PRJNA285791
SRA SRP059034

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Supplementary file Size Download File type/resource
GSE69479_RAW.tar 1.4 Gb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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