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Status |
Public on Jan 01, 2016 |
Title |
1,25(OH)2D3 time course in THP-1 cells |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
26715761, 33753848 |
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Submission date |
May 27, 2015 |
Last update date |
Apr 06, 2021 |
Contact name |
Carsten Carlberg |
E-mail(s) |
carsten.carlberg@uef.fi
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Organization name |
University of Eastern Finland
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Department |
Institute of Biomedicine
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Street address |
Yliopistonranta 1D
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City |
Kuopio |
ZIP/Postal code |
70211 |
Country |
Finland |
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Platforms (1) |
GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
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Samples (35)
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GSM1697099 |
RNA-seq at 4 h 1,25(OH)2D3, replicate A |
GSM1697100 |
RNA-seq at 24 h EtOH, replicate A |
GSM1697101 |
RNA-seq at 24 h 1,25(OH)2D3, replicate A |
GSM1697102 |
RNA-seq at 2.5 h EtOH, replicate B |
GSM1697103 |
RNA-seq at 2.5 h 1,25(OH)2D3, replicate B |
GSM1697104 |
RNA-seq at 4 h EtOH, replicate B |
GSM1697105 |
RNA-seq at 4 h 1,25(OH)2D3, replicate B |
GSM1697106 |
RNA-seq at 24 h EtOH, replicate B |
GSM1697107 |
RNA-seq at 24 h 1,25(OH)2D3, replicate B |
GSM1697108 |
RNA-seq at 2.5 h EtOH, replicate C |
GSM1697109 |
RNA-seq at 2.5 h 1,25(OH)2D3, replicate C |
GSM1697110 |
RNA-seq at 4 h EtOH, replicate C |
GSM1697111 |
RNA-seq at 4 h 1,25(OH)2D3, replicate C |
GSM1697112 |
RNA-seq at 24 h EtOH, replicate C |
GSM1697113 |
RNA-seq at 24 h 1,25(OH)2D3, replicate C |
GSM1697277 |
FAIRE-seq at 0 h, replicate A |
GSM1697278 |
FAIRE-seq at 2 h, replicate A |
GSM1697279 |
FAIRE-seq at 24 h, replicate A |
GSM1697280 |
FAIRE-seq at 48 h, replicate A |
GSM1697281 |
FAIRE-seq at 0 h, replicate B |
GSM1697282 |
FAIRE-seq at 2 h, replicate B |
GSM1697283 |
FAIRE-seq at 24 h, replicate B |
GSM1697284 |
FAIRE-seq at 48 h, replicate B |
GSM1697285 |
FAIRE-seq at 0 h, replicate C |
GSM1697286 |
FAIRE-seq at 2 h, replicate C |
GSM1697287 |
FAIRE-seq at 24 h, replicate C |
GSM1697288 |
FAIRE-seq at 48 h, replicate C |
GSM1697289 |
FAIRE-seq at 0 h, mix of replicates A, B, C |
GSM1697290 |
FAIRE-seq at 48 h, mix of replicates A, B, C |
GSM1714039 |
THP-1, CTCF ChIP-seq, 24 h EtOH |
GSM1714040 |
THP-1, CTCF ChIP-seq, 24 h 1,25(OH)2D3 |
GSM1714041 |
THP-1, input |
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This SuperSeries is composed of the following SubSeries: |
GSE69284 |
RNA-seq 1,25(OH)2D3 time course in THP-1 cells |
GSE69297 |
FAIRE-seq 1,25(OH)2D3 time course in THP-1 cells |
GSE69962 |
CTCF ChIP-seq in human monocytic THP-1 cells with replicates (4) |
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Relations |
BioProject |
PRJNA285106 |
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