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Series GSE68746 Query DataSets for GSE68746
Status Public on May 12, 2015
Title Next Generation Sequencing (NGS) comparison of two MVT1 cells subpopulations, CD24- cells and CD24+ cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study is to compare the transcriptome of the 2 MVT1 subpopulations in order to identify new genes and pathways that stands beyond the CD24+ aggressive phenotype
Overall design mRNA profiles of CD24- and CD24+ cells were generated by deep sequencing, in triplicate, using Illumina HiSeq 2500
Contributor(s) Rostoker R, Sachidanandam R, Jayaprakash A
Citation(s) 26040280, 26484297
Submission date May 11, 2015
Last update date May 15, 2019
Contact name Ravi Sachidanandam
Organization name Girihlet Inc.
Street address 2945 Webster St
City Oakland
State/province CA
ZIP/Postal code 94609
Country USA
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM1680427 mvt_cd24_neg_1
GSM1680428 mvt_cd24_neg_2
GSM1680429 mvt_cd24_neg_3
SRA SRP058190
BioProject PRJNA283815

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68746_RAW.tar 1.3 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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