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| Status |
Public on Apr 21, 2016 |
| Title |
Expression of gallstone disease-associated genes in non-diseased and diseased gallbladder and liver samples |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Following a large-scale genome-wide association study of gallstone disease, we performed RNA sequencing from tissues of four human gallbladders (3 healthy controls and 1 case with chronic gallstones) and one liver sample from the gallstone case. We aimed to determine the expression patterns of gallstone disease-associated genes in gallbladder and liver, two organs of interest in disease etiology.
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| Overall design |
RNA-seq of four female human gallbladders (3 healthy controls and 1 case with chronic gallstones) and one liver sample from the gallstone case.
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| Contributor(s) |
Wakabayashi Y, Eicher JD, Yang Y, Zhu J, Johnson AD |
| Citation(s) |
27094239 |
| |
| Submission date |
Mar 02, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Andrew Danner Johnson |
| E-mail(s) |
johnsonad2@nhlbi.nih.gov
|
| Phone |
508-663-4082
|
| Organization name |
National Heart, Lung and Blood Institute
|
| Department |
Cardiovascular Epidemiology and Human Genomics Branch
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| Lab |
Johnson Lab
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| Street address |
The Framingham Heart Study
|
| City |
Framingham |
| State/province |
MASSACHUSETTS |
| ZIP/Postal code |
01746 |
| Country |
USA |
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| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
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| Samples (5)
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| Relations |
| BioProject |
PRJNA276896 |
| SRA |
SRP055718 |
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