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Series GSE65450 Query DataSets for GSE65450
Status Public on Jul 01, 2015
Title Pre-ovulatory follicle size modulates the periovulatory endocrine environment and endometrial tissue phenotype in cattle
Organism Bos indicus
Experiment type Expression profiling by high throughput sequencing
Summary Purpouse: Aims of this study were (1) to characterize the endometrial transcriptome, (2) to identify functional pathways, and (3) to molecularly characterize selected pathways overrepresented in the endometrium of day 7 post-ovulation induction of cows treated to ovulate larger versus smaller follicles
Methods: Seventy-four multiparous, nonlactating, presynchronized Nelore cows received a progesterone-releasing device and estradiol benzoate on Day–10 (D−10). Animals received cloprostenol (large follicle-large CL group; LF-LCL; N = 35) or not (small follicle-small CL group; SF-SCL; N = 39) on D−10. Progesterone devices were withdrawn and cloprostenol administered 42 to 54 hours (LF-LCL) or 30 to 36 hours (SF-SCL) before GnRH treatment (D0). Tissues were collected at slaughter on D7. Transcriptional profiling of the endometrial tissue was performed by RNA-seq and protein markers for proliferation and apoptosis were identified by immunohistochemistry.
Results: Functional enrichment data indicated that LF-LCL endometrium expressed greater abundance of genes associated with biosynthetic and metabolic processes, whereas SF-SCL endometrium .gene expression profile was biased towards cell proliferation. Extracellular matrix-related genes were also upregulated in the SF-SCL endometrium suggesting reorganization of the ECM towards a proliferation permissive phenotype. Immunohistochemistry data confirmed the greater proliferative activity observed in SF-SCL endometrium I comparison to LF-LCL counterparts, and indicated a time-related transition within experimental group. In conclusion, the periovulatory endocrine milieu regulates bovine endometrial gene expression. Furthermore, timing and amplitude of ovarian steroid secretion pattern seem to determine the transition from a proliferation permissive to a biosynthetic and metabolically active endometrial phenotype, which may be associated with the preparation of an optimally receptive uterine environment.
Conclusion: the periovulatory endocrine milieu affected D7 endometrial molecular signature. Main pathways affected were related to cell proliferation, ECM composition and remodeling, biosynthetic and metabolic processes. Reported data further suggest that the endometrial tissue from LF-LCL cows experienced an early proliferative phase (D4), whereas the SF-SCL endometrium, exposed to a distinct periovulatory endocrine environment, expressed a delayed onset of the proliferative activity (D7).
 
Overall design endometrial mRNA profiles of endocrine manipulated cows were generated by deep sequencing using Illumina HiScanSQ platform
 
Contributor(s) Mesquita F, Ramos R, Andrade S, Gasparin G, Gonella A, Lehmann Coutinho L, Binelli M
Citation(s) 26178716, 26981354
BioProject PRJNA270391
Submission date Jan 30, 2015
Last update date May 15, 2019
Contact name Mario Binelli
E-mail(s) binelli@usp.br
Phone 19998591388
Organization name University of Sao Paulo (USP)
Department department of animal reproduction
Lab Molecular Physiology and Endocrinology
Street address Rua Duque de Caxias Norte, 255
City Pirassununga
State/province SP
ZIP/Postal code 13635-900
Country Brazil
 
Platforms (1)
GPL19671 Illumina HiScanSQ (Bos indicus)
Samples (6)
GSM1597945 770_LF/LCL
GSM1597946 1145_LF/LCL
GSM1597947 1499_LF/LCL
Relations
SRA SRP051330

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Supplementary file Size Download File type/resource
GSE65450_Mesquita_processed_data.txt.gz 408.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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