|
| Status |
Public on Aug 25, 2015 |
| Title |
Postnatal epigenetic development of mouse intestinal stem cells (RNA-seq) |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We used RNA sequencing to quantify the gene expression levels in the intestinal stem cells (ISCs) or their progeny during the suckling period of mouse colon development.
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| |
|
| Overall design |
Lgr5-EGFP mice were used to identify ISC populations in the colons. RNA sequencing was performed using EGFP labeled Lgr5+ ISCs and epithelial cell adhesion molecule (EpCAM) labeled epithelial cells isolated at the beginning and end of the suckling period (postnatal day 0-P0 and P21).
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| |
|
| Contributor(s) |
Shen L |
| Citation(s) |
26420038 |
| |
| Submission date |
Dec 10, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Lanlan Shen |
| E-mail(s) |
Lanlan.Shen@bcm.edu
|
| Organization name |
Baylor College of Medicine
|
| Street address |
1100 Bates Ave.
|
| City |
Houston |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (4)
|
| GSM1563529 |
differentiated epithelial cells at P21 (RNA-seq) |
|
| Relations |
| BioProject |
PRJNA269976 |
| SRA |
SRP051045 |
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