|
| Status |
Public on Feb 03, 2015 |
| Title |
Next Generation Sequencing Comparison of C57BL/6J and BC027072 -/- Eye Transcriptomes |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report the single base pair analysis of the ocular transcriptome from wild type and BC027072 knockout animals. Comparison was analyzed to understand gene expression changes in a mouse model for early onset retinal degeneration which phenocopies a human form of autosomal recessive retinitis pigmentosa
|
| |
|
| Overall design |
Eye mRNA profiles were generated from 3 week-old C57BL/6J and BC027072 -/- in triplicate and sequenced using the Illumina HiSeq 2500
|
| |
|
| Contributor(s) |
Kevany BM, Palczewski K |
| Citation(s) |
25616964 |
| |
| Submission date |
Dec 03, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Brian Michael Kevany |
| E-mail(s) |
bmk47@case.edu
|
| Phone |
2163683063
|
| Organization name |
Case Western Reserve University
|
| Department |
Pharmacology
|
| Lab |
W317
|
| Street address |
10900 Euclid Ave.
|
| City |
Cleveland |
| State/province |
OH |
| ZIP/Postal code |
44106 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA269130 |
| SRA |
SRP050483 |
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