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Series GSE63472 Query DataSets for GSE63472
Status Public on May 20, 2015
Title Drop-Seq analysis of P14 mouse retina single-cell suspension
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary A cell suspension was prepared from wild-type P14 mouse retinas, and single-cell mRNAseq libraries were generated with Drop-Seq.
Overall design Drop-Seq was performed on four separate days using the same age (P14) and strain (C57BL/6). On day 1, replicate 1 was obtained. On day 2, replicates 2 and 3 were obtained. On day 3, replicates 4-6 were obtained. On day 4, replicate 7 was obtained.
Contributor(s) Macosko EZ
Citation(s) 26000488, 32888429
Submission date Nov 19, 2014
Last update date Apr 25, 2022
Contact name Evan Macosko
Organization name Harvard Medical School
Department Genetics
Lab McCarroll Lab
Street address 77 Avenue Louis Pasteur, NRB 260
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (7)
GSM1626793 P14 mouse retina 1
GSM1626794 P14 mouse retina 2
GSM1626795 P14 mouse retina 3
This SubSeries is part of SuperSeries:
GSE63473 Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets
BioProject PRJNA267857
SRA SRP050054

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63472_P14Retina_logDGE.txt.gz 316.8 Mb (ftp)(http) TXT
GSE63472_P14Retina_merged_digital_expression.txt.gz 50.7 Mb (ftp)(http) TXT
GSE63472_RAW.tar 90.6 Gb (http)(custom) TAR (of BAM, TXT)
GSE63472_mm10_reference_metadata.tar.gz 862.9 Mb (ftp)(http) TAR
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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